SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI3G04210.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI3G04210.1
Domain Number 1 Region: 758-1040
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 7.01e-76
Family Protein kinases, catalytic subunit 0.00023
Further Details:      
 
Domain Number 2 Region: 159-520
Classification Level Classification E-value
Superfamily RNI-like 7.38e-59
Family Cyclin A/CDK2-associated p19, Skp2 0.053
Further Details:      
 
Domain Number 3 Region: 558-664
Classification Level Classification E-value
Superfamily L domain-like 6.8e-24
Family Polygalacturonase inhibiting protein PGIP 0.015
Further Details:      
 
Domain Number 4 Region: 83-192
Classification Level Classification E-value
Superfamily L domain-like 0.0000000125
Family Polygalacturonase inhibiting protein PGIP 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G04210.1   Gene: BRADI3G04210   Transcript: BRADI3G04210.1
Sequence length 1056
Comment pep:novel chromosome:Brachy1.0:3:2878010:2881227:-1 gene:BRADI3G04210 transcript:BRADI3G04210.1
Sequence
MQTLHFSNKTYSKKLHIPSVGLALVLLISLASPTSSCTEHEKGSLLQFLAGLSKDGDLAA
SWQDGTDCCDWEGIACRQDKTVTDVLLASKGLEGHISESLGNLTRLQHLNLSHNSLSGGL
PLELVSSSSILVIDVSFNQLNGTLLELPSSTPARPLQVLNVSSNLFAGQFPSTTWKAMEN
LITLNASNNSFSGPIPTEFCNSSQFFTVLDLCLNKFNGSIPPGLGDCSMLRVLKAGYNNL
SGKLPDELFNATSLEYLSFPNNHLHGVLDDTHIIDLRNLVTLDLGGNNFSGKLPDYIGQL
KKLEEFHLDRNMMSGELPSSLSNCTNLITIDLKNNQFTGELTKVNFSNLTNLKTLDLWSN
NFIGTVPESMYSCSNLTALRLSNNSLHGQLSSRIGNLKYLSFLSLGKNNFTNITNALQIL
KSSKKLTTLLIGHNFQGEILPQDETIGGFENLQVLDIEGCNFTGKIPLWISRVTNLEMLL
LNSNQLTGSIPEWINSLSNLFFVDVSDNSLTGEIPLTLMEMPMLKSTENAINLDPRVFEL
PVYNGPSLQYRVLTSFPTVLNLSKNNFTGLIPPEIGQLKVLAVLDFSFNKLSGQIPRSIC
NLTNLQVLDLSSNNLTGSIPAALNSLHFLSAFNISNNDLEGPIPSGGQFHTFENSSFDGN
PKLCGSMLTHKCGSTSIPTSSTKRDKVVFAIAFSVLFGGITILLLLGCLIVSVRMKGFTA
KNRRENNGDVEATSSYSSSEQILVVTWLPQGKGEENKLNFTDILRATDNFDKENIIGSGG
YGLVYKADLPDGSKLAIKKLHGEMCLMEREFSAEVDALSMARHENLVPLWGYCIQGNSRF
LIYSYMENGSLDDWLHNRDDDATSFLDWPIRLKIAQGASMGLSYIHDVCKPHIVHRDIKS
SNILLDKEFKAYVADFGLARLILPNKTHVTTELVGTMGYIPPEYGQAWVSTLRGDMYSFG
VVLLELLTGRRPVPVLSTSKELVPWVLQMRSEGKQIEVLDPKLQGTGYEEQMLKVLEAAC
KCVDNDQFRRPTIMEVVSCLANIEGDLQTQKLAKTG
Download sequence
Identical sequences I1HXC2
15368.BRADI3G04210.1 EG:BRADI3G04210.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]