SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for EG:BRADI3G07840.2 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI3G07840.2
Domain Number 1 Region: 4-113
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.69e-28
Family Canonical RBD 0.0014
Further Details:      
 
Weak hits

Sequence:  EG:BRADI3G07840.2
Domain Number - Region: 236-305
Classification Level Classification E-value
Superfamily Myosin rod fragments 0.0654
Family Myosin rod fragments 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G07840.2   Gene: BRADI3G07840   Transcript: BRADI3G07840.2
Sequence length 347
Comment pep:novel chromosome:Brachy1.0:3:5998686:6003892:1 gene:BRADI3G07840 transcript:BRADI3G07840.2
Sequence
MAVNEDTSVYVGGLPYDATEEKLRRYFGSCGEIIAVKVINDQRVRGKCYGFVTYSHPKAA
QRAINEMDGQQIGNRAVKVNQVRSARSGGRDFGGHDGFRRDPGRDGYWDRRDRDRSYDRD
RDGDPYHDRDIDRPRDHDRDRYYERRGFDQDIDYPMDRDHEGDERRPRDHDRGDHDHPVE
THNMDSDNDRDKENSKGYGSDRDKDKDQPPRKRFSRPKGRDSRDISSSSDDLHSDVKHQL
EKAIQTHDDLEIEIKDKVTSKEHQIADLQRKYQKLEDELAAARKVSTERQVVVTKLYKTF
LQVQDFSERAKIYEKELQLLVDAAMVEVDMAEDATTKDGSGYENGVV
Download sequence
Identical sequences I1HYM3
EG:BRADI3G07840.2

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