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Domain assignment for EG:BRADI3G13620.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI3G13620.1
Domain Number 1 Region: 15-119
Classification Level Classification E-value
Superfamily TPR-like 5.6e-25
Family Tetratricopeptide repeat (TPR) 0.00069
Further Details:      
 
Domain Number 2 Region: 195-271
Classification Level Classification E-value
Superfamily RING/U-box 1.84e-24
Family U-box 0.00027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G13620.1   Gene: BRADI3G13620   Transcript: BRADI3G13620.1
Sequence length 274
Comment pep:novel chromosome:Brachy1.0:3:12121767:12125216:1 gene:BRADI3G13620 transcript:BRADI3G13620.1
Sequence
MSPAAAAEASSKRQAELLKQEGNGFFKRDRISAAIDAYTGAIALCQNVAVYWTNRALCFK
KRNEWDRVEEDCRRAIQLDSHSVKAHYMLGLALLNKQELAEGIKELEKALELGRGAHPTG
YMVEDIWQELSKAKYIEWESRSKERSSQLHRLKAACESALRNYNSVDNPTADVCQEHLVE
LDEVFRKAAKTDTPTEIPDHLCCKITLDVFRDPVITPSGITYERSVLLDHLNKVGRFDPV
TREALEPHQLIPNLAMKEAVDVFLGEHGWAYRAR
Download sequence
Identical sequences I1I0G5
15368.BRADI3G13620.1 XP_003573296.1.954 EG:BRADI3G13620.1

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