SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for EG:BRADI3G38350.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI3G38350.1
Domain Number 1 Region: 25-146
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.000000000000307
Family PWWP domain 0.0099
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G38350.1   Gene: BRADI3G38350   Transcript: BRADI3G38350.1
Sequence length 426
Comment pep:novel chromosome:Brachy1.0:3:40879873:40885351:1 gene:BRADI3G38350 transcript:BRADI3G38350.1
Sequence
MVKKTTQKGYGIAGCPSSSELPENNARQKFRLGDITWVKHGSSSWWPAQVIDEASVSSKP
KKKTGHDALVRLYGTCEYVYVDPWKSNMEFEMILKEENKTAREAFHEVLQKELSGFKSPS
DYDEEGAANSKAKTASRKVRKQEGLKRSGHGSLKELAGSEPEQEVGSNATTRVAVRGGRK
PKGGRQSSPLDKDQGIDKASSEVCAEGLRDKTQKQVSAVRDKKGRMETPGTSVVEGSRRS
GRTNAKKYFDTAENSTSQLHHTSASENAAEVGDITSENQSEHNNGSMADATHREIKAMVR
DILLGDIIARQHAAEMAYVDEVIYGICDATEQNVVDGTAADIEGGRGVKRTGSQLEADSS
NVTQRTRKGKAKKQGNSPNSSPSRDAAMEGSEQRRTRQIKIMQSLGLIAPSGSPFGKNGL
VATTHQ
Download sequence
Identical sequences I1I7W6
XP_010235217.1.954 15368.BRADI3G38350.1 EG:BRADI3G38350.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]