SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI4G04130.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI4G04130.1
Domain Number 1 Region: 465-598
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 3.51e-29
Family Protein kinases, catalytic subunit 0.0015
Further Details:      
 
Domain Number 2 Region: 320-384
Classification Level Classification E-value
Superfamily L domain-like 7.6e-17
Family Polygalacturonase inhibiting protein PGIP 0.013
Further Details:      
 
Weak hits

Sequence:  EG:BRADI4G04130.1
Domain Number - Region: 607-680
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 0.097
Family Protein kinases, catalytic subunit 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI4G04130.1   Gene: BRADI4G04130   Transcript: BRADI4G04130.1
Sequence length 714
Comment pep:novel chromosome:Brachy1.0:4:3358061:3362806:1 gene:BRADI4G04130 transcript:BRADI4G04130.1
Sequence
MSAATATARRRYRSPVLLLLCFFASAPIHGQPDVLGTPNVSWPQTSLRNVPPTSPRALTR
LISRTGFISIDCGIAEGSSYTDGSTRGLKYVSDAGFVDAGAGANAGVRPPYSQQAQPARY
LNVRYFPGPAAGARSCYTLRELSPGAKYLVRCGFYYGNYDKLRTLPAFDLYLGVDRWATV
NVTTPDERYILEAVVVSPASFLQVHALKFSLRCRHLGFSFKSQVFGSNYCRVLQVCLVNI
GLGTPFISWLDLRPLGAAMYPEATLKQSLLLLNLRRPGAKYALNRYHFWRPATSYGVFRS
PSLFNNALFERQNSQKSHQNLASNVLTGAIDPSFGHLKSLQHLDLSTNTLSGPIPDFLAQ
MPSLTFLDLSNNKLSGSVPAALLQKHQNGSLILRIGNNTNICDNGASTCDPDKKEKNRTL
VTAISVTIPVATLLFVATILILRRRRNKQGLIPDTWMANNGRLSGPRERYNLFENGQFSY
KELKLITANFREEIGRGGFGAVFLGHLENERTVAVKICSKTSSEGDKEFLAEAQHLGRVH
HRNLVSLIGYCKDKKHLGLVYEYMHGGDLEDCLRGEASVATPLSWHRRLKIAIDSAHGQP
PALAISDTESIHIAEWVRQKLSESEGNIESIADMKMGTEYDIDSVCKVTELALQCKERPS
RERPTMTEVVVELKECLELEVSRGMGNYSSVASSANSLSEMSAELRSDAQGSHL
Download sequence
Identical sequences I1IHC1
15368.BRADI4G04130.1 EG:BRADI4G04130.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]