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Domain assignment for EG:BRADI4G13190.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI4G13190.1
Domain Number 1 Region: 139-460
Classification Level Classification E-value
Superfamily RNI-like 2.59e-66
Family Cyclin A/CDK2-associated p19, Skp2 0.071
Further Details:      
 
Domain Number 2 Region: 885-1207
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 7.69e-66
Family Protein kinases, catalytic subunit 0.00021
Further Details:      
 
Domain Number 3 Region: 404-664,691-824
Classification Level Classification E-value
Superfamily RNI-like 3.14e-63
Family 28-residue LRR 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI4G13190.1   Gene: BRADI4G13190   Transcript: BRADI4G13190.1
Sequence length 1220
Comment pep:novel chromosome:Brachy1.0:4:13384941:13389021:1 gene:BRADI4G13190 transcript:BRADI4G13190.1
Sequence
MNTQCDLIVSACYTSGTSTIYKYQKIPMEESQDQNCLPTSRSMHLRRGKIAFVGAPNTTL
PLLAIVLIYLANFCPHVCSLATTVPHNASENDRKALLCLRSHLSDPARALVSWGNKSFQF
CHWRGVTCSTRHAGRVVALDLESLNITGQIFPCIGDLLFLSRIHMVDNQINGPIPSEIGC
LTRLKYLNLSMNSITGVIPDTISSCSRIQVIDLSMNSITGVIPNTISSCSRLEVIDLGYN
SITGLIPNTISSCSCLMVIRLLNNSIEGEIPISLAHCSSLQEITFSNNNLNGSIPPGIGL
LPRLTFLFLPSNKIEGKIPKSLGSSVSLLRVVLGNNSLTGGIPPMLANCSSLHNLDLMKN
KLNGEIPSELFNNPSLITLDLSYNKFMGPIPSSSPIAPKLQYVSLAENNLTGEIPPILER
FSSLSSLILAQNKFHGSIPESLTKIPTLTVLDLAYNNLSGAVPPAIYTIKSPTYLGLGDN
QLTGRIPSDIAYTLPNIRTLVMEGNHFDGPLPASLVKASNLQVLELRHNAFTGLIPSFWC
LPYLTQLDLGANLFEAVDWSSLSSIPSSAQLQAIYLDNNKLHGIIPSSIGNLLKSLQMLF
LSENRFTGTIPSEIGKLTNLTVLQIAGNLLSGRIPDALGNLSKLFVLGLSRNKLSGEIPQ
SIGNFEKLGELYMEENNLSGFQWKYSSLVGCKNLVMLNLSCNGFNGSIPPGLLSIFSLSE
GVDLSYNNLNGSIPSQIGSLINLESLNVSNNQLSGEIPHAVGECLHLESLRLEVNFFNGS
IPESLMSLRGITEMDLSENNLSGEIPDFFEDFSSLQLLNLSFNSLEGIVPAGGAFSNSSK
VFIQGNKDLCTRTPMLQLPLCTAAPTKRKKTLHIISIVVPLATAILVLMSLKKFTYVELA
KATNNFSSANLVGSGGFGVVYKGTFKFQAHPVAIKMFKLDQIGAPKNFSTECEVLRNTRH
RNLMRVISVCSSFDETGNEFKALVLDYMENGNLESWLHLEVYKQKQKRPLSLGSRIIIAK
DIAAALDYLHNWCTPPLVHCDLKPSNVLMDDAMCAHVSDYGLAKFLCGHSSASLNDIPSI
NGPRGSVGYIAPEYGMGCEISTAGDVYSYGVILLEMLTGKHPTDDIFKDGLNLHKLVVSA
FPEDIGDILESSLIPYYKLEEANHNSDSEYCPVAGIQNCIIQMTKLGLKCSMDSPKDRPP
MQDAYAEMIMIRDAFSALQG
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Identical sequences I1IK72
EG:BRADI4G13190.1 15368.BRADI4G13190.1

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