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Domain assignment for EG:BRADI4G13220.2 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI4G13220.2
Domain Number 1 Region: 62-142
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000000000326
Family RING finger domain, C3HC4 0.013
Further Details:      
 
Weak hits

Sequence:  EG:BRADI4G13220.2
Domain Number - Region: 274-300
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000541
Family Retrovirus zinc finger-like domains 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI4G13220.2   Gene: BRADI4G13220   Transcript: BRADI4G13220.2
Sequence length 633
Comment pep:novel chromosome:Brachy1.0:4:13522346:13526509:-1 gene:BRADI4G13220 transcript:BRADI4G13220.2
Sequence
MFNYLLICSDMSCPRYLNIEGSGLSEAMPKEIVVDNSTEVLGLEEGKREIETSSKARELE
KMEQRTNMDSPAELRCFLCETIFEDAVMMTCCRHNFCNRCIISALAEIKKCPKCSSTRCT
TNDLLPNLSLRKAIEHFLDDPGRMYAPDVESCIEANESSCALSIHQQEQKLPCSPSVTGK
DFNQTMSPVKQVKKSSSIKIRLDGNKPTEAVSALPQEAPRNVDFQSASSSKMYQNIAQES
GQYLSFAYQSSPQSTSNLFSSDADGNRFAAPVTRDRKGGRTCYRCGSPNHLIRYCPVASN
EQAEDSTFHGDAYGPPNWQGSMFHPLQPYANSYGTPGVIPFDPGVVPASPFGVPSYMPPF
YGRMQNPYAFMGMRGMPSPVLPVLQQSHTGLGIHDNVKSQETPSERGGREYDCDTISEDY
PDDDGRRSHKLYPTEKNSDRYYDVGSTNVKKRHRKDKYCSPTREKRTYSSEQELVDQKHS
VEFGSCGRERTNHYCKQSASEWHGIPDNSIQDSKQRSKQHDRSASGRRDESGRKFRSDYS
DYSRHQSCKEKIHADKADDGHKSSKNTYGHKHRVQETDYKRDSKVTITSQSSRHGTTKVG
SSNGHLGRDRVMGDGRHGDDESDHYRHKRKGRH
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Identical sequences I1IK84
EG:BRADI4G13220.2

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