SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI4G34880.2 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI4G34880.2
Domain Number 1 Region: 6-241,290-315
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 2.44e-65
Family BAR domain 0.0012
Further Details:      
 
Domain Number 2 Region: 501-640
Classification Level Classification E-value
Superfamily ArfGap/RecO-like zinc finger 2.49e-37
Family Pyk2-associated protein beta ARF-GAP domain 0.00024
Further Details:      
 
Domain Number 3 Region: 204-326,365-426
Classification Level Classification E-value
Superfamily PH domain-like 3.63e-24
Family Pleckstrin-homology domain (PH domain) 0.009
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI4G34880.2   Gene: BRADI4G34880   Transcript: BRADI4G34880.2
Sequence length 696
Comment pep:novel chromosome:Brachy1.0:4:40441751:40450277:-1 gene:BRADI4G34880 transcript:BRADI4G34880.2
Sequence
MYFSRLDDSPMFRKQMQSLEEGAELLRERCLKYHKGCRKYTEGLGEAYDGDIAFASSLEA
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDKLLQFVDMDLHDVKD
ARKRFDKASLLYDQARERYLSLKKGTRSDIATAVEDELHSARSSFEQARFNLVTALSNIE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLAYAQQSRERSNYEQAALVER
MQEFKRQIDRESRWSPTGMTDSPNGDGIQAIGRSSHKMIEAVMQSASKGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDNRGMLYYYRKQNSRPSSGYPNQRSSTPSEHGSGLLSRWFSSH
YHGGVHDEKSVARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESAMDQMDWIE
KITGVIANLLSSQSPERRLLLSPKGSGHHRTTSESSSFSSSTELDHSISEDCMMEKNPGS
GYFEHSSRVTQHHRTSMKPDRPIELLRKVVGNDICADCGAAEPDWASLNLGVLLCIECSG
VHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNTFANTIWEEMLPLSSSVDHGDTPRA
DGIENTSPNLAVSKPKHSDPIALKEKFIHAKYADKDFVRKRNMDETQLAQQMWDNHCFCK
SNRLRHQMEALDALIAVRLRRFLPRTPFLLPAQVSA
Download sequence
Identical sequences I1IRP6
EG:BRADI4G34880.2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]