SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI4G37900.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI4G37900.1
Domain Number 1 Region: 320-637
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 9.84e-68
Family Protein kinases, catalytic subunit 0.00017
Further Details:      
 
Domain Number 2 Region: 55-207
Classification Level Classification E-value
Superfamily L domain-like 7.65e-32
Family Polygalacturonase inhibiting protein PGIP 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI4G37900.1   Gene: BRADI4G37900   Transcript: BRADI4G37900.1
Sequence length 665
Comment pep:novel chromosome:Brachy1.0:4:42918857:42922981:1 gene:BRADI4G37900 transcript:BRADI4G37900.1
Sequence
MMRVGASSYMLPETGRRRRPAPPSALNVLFTSMNKPSELSGWKADGGDPCDDDDEWKGID
CSGSDVTEIDVSNNNLNGDIPYSLPPNLVQLNLQGNSFSGGLPFSISKMSDLETLNLGKN
HLNGQLADIFSHLPKLSTMDLSFNRFSGNLPHSFQSLTGIKTLNLEDNQFSGHIDILAKL
PLDDLNLQNNKFTGWIPSKLKDIDSLETGGNPLSSGSAPPGMMKGSSAVSSSSGGNDGGI
NGFAIGAMVIAVLLAALILLSVLKRKRSSPVSSHYYMDDSGHSSTIDMKSLENSSSMDCR
TPPAVPRKSINDNEFENKLNNSRRISDPISPVTYLSSDLQTATGSFHSSRLIGQGTTGRV
YKAKYVDGRVLAVKKFDPLSFSGSSDFMEIVNSISKLRHANICEIVGYCSDPGYYMLVYN
YQSSGSLYEFLHLSDDYSKPLTWDTRVRIALGTARALEYLHEVCSPSVIHKNVKSSNVLL
DADLNPRLSDCGLTFFYEVPAIRTLLESHEPLILLAPKAISLQDTSESLGPGYSAPECTR
SSGYVMKSDVYSFGVVMLELLTGRKAYDSSKPRAEQCLVKFVTPQLHDIDALGTLADPAL
RGLYPPKALSRFADVIARCVQSDPEFRPSMSEVSQMLTGCIQRTTSNRRIGGPLSTSQRS
DTSDW
Download sequence
Identical sequences I1IST7
15368.BRADI4G37900.1 EG:BRADI4G37900.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]