SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI4G39060.2 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI4G39060.2
Domain Number 1 Region: 374-745
Classification Level Classification E-value
Superfamily Oxysterol-binding protein-like 1.57e-114
Family Oxysterol-binding protein 0.00048
Further Details:      
 
Domain Number 2 Region: 41-87,125-182
Classification Level Classification E-value
Superfamily PH domain-like 1.76e-19
Family Pleckstrin-homology domain (PH domain) 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI4G39060.2   Gene: BRADI4G39060   Transcript: BRADI4G39060.2
Sequence length 754
Comment pep:novel chromosome:Brachy1.0:4:43735023:43743055:1 gene:BRADI4G39060 transcript:BRADI4G39060.2
Sequence
MNPLCCIAPVSLDHAAEYHHRPRILAAAPTPPPPPQPEAAAPPQPEAGAAVAGVLHKWVN
YGKGWRSRWFVLEDGVLSYYKLRGGGAGGAGNGDSSASTARVIGEGDALRRAREDAAAAG
KQWKPFGEIHLKVSSIRASKSDDKRLYIFSGTKTLHLRCETEEDRNAWVESLLSAKDRFP
RSLTSNDFGPVADIALSTEKLRVRLLQEGLNETVVKECESIMTTELLELHNQMKSQQQQH
SVLVDRLRQLETEKVELERTVVHETKEREAHGYTNGRYSDFHSVLSGGSGSESDPDTASQ
VADVESDEDEVTYFDTRDFLSVESLRSASSRRRELLTNGCSGLEYIRDSTVSTVKSIQYP
FVKRRDKLPEPKEKEKPVGLWSIIKENIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYL
VDNALQWGKQGDSLMRILHVAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLRFFS
EKVSHHPMVVACHCDGRGWKFWGDSNLKGKFWGRSIQLDPIGVLTLQFDDGETFQWSKVT
TSIYNIIIGKIYCDHYGTMRIKGSGHYSCKLKFKELSIIDRNPHQVHGFVQDNRTGQKVA
MLIGKWDEAMYYVLGDPSAKPKWYDPMSEAVLLWERDKSMNQTRYNLSPFAISLNELAPH
MLTKLPPTDSRLRPDQRHLENGEYEMANSEKLRLEQLQRQARRLQEKGWQPRWFRKDEDD
SYCYVGGYWEAREKGNWDGIPEIFGQSSTLPGWS
Download sequence
Identical sequences I1IT81
15368.BRADI4G39060.1 XP_003578711.1.954 EG:BRADI4G39060.1 EG:BRADI4G39060.2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]