SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI4G42800.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI4G42800.1
Domain Number 1 Region: 425-713
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.19e-50
Family Protein kinases, catalytic subunit 0.00059
Further Details:      
 
Domain Number 2 Region: 33-227
Classification Level Classification E-value
Superfamily L domain-like 1.51e-25
Family Polygalacturonase inhibiting protein PGIP 0.0078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI4G42800.1   Gene: BRADI4G42800   Transcript: BRADI4G42800.1
Sequence length 740
Comment pep:novel chromosome:Brachy1.0:4:46692409:46694837:1 gene:BRADI4G42800 transcript:BRADI4G42800.1
Sequence
MAALGLFFLAAMGLLTSATVSAAAAVPRPEAKPSDTDALTMFRLGADAHGILANNWTTPD
ACAGRWAGVGCSPDGRRVTSLALPSLDLRGPLDPLAHLASLRALDLRGNRLNGTLRALFL
GAGAGAEGLQLLYLSSNDLSGNISGVARLSGLTRLDLADNSFSGPVSPEVLANLTGLLTL
KLQDNLFAGLLPDVATILPRLAEFNASNNRLSGRVPDAVRARFGLASLAGNAGLCGLAPP
LPACSFLPPREPAPTSPSQSSVVPSNPAASSSSSSVAPAALATPEGAGASKGAGLSAGAI
AGIAVGNALFLLALLSLLLAYCCCISNAGHGRETAARKRNRVGLEDADGDGIFGGGHGKM
QPARPGSATGRCSDDSDGARSKLVFFGDNPEAEDDSDSSTGGHRRTTSKPKCKFELDELL
RASAEMVGRGSLGTVYRAALPDGRTVAVKRLRDANPCGRDEFRRYMDLIGRLRHPNLVPL
RAFYYAKQEKLLVYDYFPGSSLHRRLHPSSSSPAPAPAPLGWASRVRLLLGAARGLACIH
GEYRGAAIPHGNVKSTNVLLLDDERGGVRAMVADFGLALLLSPAHAVARLGGYTAPEQRT
GPPRLSQEADVYGFGVLILEALTGRVPAAQEDDGRNEQRREKRQSPVVMSLPEWVRSVVR
EEWTAEVFDVELLRERGVEEEMVAVLHVALACVAEAPAQRPAMADVVRMLESVPVDDPEE
EEGSVSLSGGVTTEDDALSY
Download sequence
Identical sequences I1IUF9
15368.BRADI4G42800.1 EG:BRADI4G42800.1 XP_003577060.1.954

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]