SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI5G20380.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI5G20380.1
Domain Number 1 Region: 388-676
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 4.72e-78
Family Protein kinases, catalytic subunit 0.0000641
Further Details:      
 
Domain Number 2 Region: 290-322
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000474
Family EGF-type module 0.0095
Further Details:      
 
Weak hits

Sequence:  EG:BRADI5G20380.1
Domain Number - Region: 103-262
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.0918
Family Glycosyl hydrolase family 7 catalytic core 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI5G20380.1   Gene: BRADI5G20380   Transcript: BRADI5G20380.1
Sequence length 737
Comment pep:novel chromosome:Brachy1.0:5:23268287:23270938:-1 gene:BRADI5G20380 transcript:BRADI5G20380.1
Sequence
MEEFLHFPLLPLLLLLLTCSSPSFVHSMESSTSRCPPSNISIPYPFGIAGPGHSPSPAQG
FEITCGLSGPILHINNSVFGILNISLMDGFISILATATKQPCSGNYTDFSLEGTNFTFSD
TRNKFTAVGCDMVAMLVNGTSGYSSGCASFCSTKNIMVNGTCSGVACCQAPVPKGLKKLS
LEFTNITGQLGRHNKDNSTLACPEAFIAEENSYVFSTLDLNLTKSLQYRPVVLEWSIDGG
SCEEAKRSASYACRENSYCYDAANGIGYRCNCTNGYQGNPYLQGPDGCQDIDECSIESRC
THGCINMEGKFRCTCPSGMSGDGLKEGSGCKGIGTLQISIVAALALLLLLIVLGFWTHWL
VKKRKFEKKRQRYFMQNGGVLLKQQMFSQRAPLRVFTSGELDKATNKFSDNNIVGRGGFG
TVYKGILSDQMVVAIKRSQRIDQSQAEQFVNELVILSQVTHKNVVQLVGCCLETEVPLLV
YEFIANGALFHHLHNTSAPLSWEDRLRIAFETASALAYLHLAAKMPIVHRDVKSSNILLD
KSFTAKVSDFGASRPIPHNQTHVTTLVQGTLGYMDPEYFQTSQLTEKSDVYSFGVVLIEL
LTRERPISDGQIDEVRSLALHFSCLFHQHRLLEIVDSQVAEEAGMRHVKTVAQLAFRCLR
LKGEERPRMVEVAIELEALRRLMKQHSVLKIEGEHLLGESRCNGDMKFDAQSNSSLDGIA
KDESMEVILLPSNGLSC
Download sequence
Identical sequences I1J1C0
15368.BRADI5G20380.1 XP_003580477.1.954 EG:BRADI5G20380.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]