SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI5G23390.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI5G23390.1
Domain Number 1 Region: 229-401
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 0.00000133
Family NRPS condensation domain (amide synthase) 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI5G23390.1   Gene: BRADI5G23390   Transcript: BRADI5G23390.1
Sequence length 405
Comment pep:novel chromosome:Brachy1.0:5:25355640:25357076:1 gene:BRADI5G23390 transcript:BRADI5G23390.1
Sequence
MSPVRIIESSHVAVPATAALPQEPIKLTAMEAVWVVLPVLQHVLLYDLGADMPRFDAILQ
SLRSSLAETLRSFAPLAGKLVHLEATGDVTISCSASTASSHALRWRPGGRDYSAPRRSRR
RSLWAFVEAWAAACRGETPSMAAAAPSFDRSLVKLPNGEELARSVLRDLAPNLPLATTPP
SVVEDRTRFTRRTFTLDSPGIQRLKQQILHLGESHGLPLSRPPSVFAAVMALVWTSFARC
KPSPSDNDNDDVPLFFFADVRDRLDPPVSLGYIGACLTACLAKLPRRELHSERALAAAAA
AVQDEVRKMKEDPVAGHNFLRPEVTDFMDRLMLVSGSSGFRAYEVADFGWGKPRRTEPIR
MNHDGQVALMRARDGSGVQVSVSMLQPVHMDEFKSHFHKLLGYSS
Download sequence
Identical sequences I1J2D7
15368.BRADI5G23390.1 EG:BRADI5G23390.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]