SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI1G22670.1 from Brachypodium distachyon

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  EG:BRADI1G22670.1
Domain Number 1 Region: 16-94
Classification Level Classification E-value
Superfamily Translation proteins SH3-like domain 1.2e-27
Family eIF5a N-terminal domain-like 0.00021
Further Details:      
Domain Number 2 Region: 87-157
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 9.71e-25
Family Cold shock DNA-binding domain-like 0.0014
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G22670.1   Gene: BRADI1G22670   Transcript: BRADI1G22670.1
Sequence length 160
Comment pep:novel chromosome:Brachy1.0:1:18192065:18194700:1 gene:BRADI1G22670 transcript:BRADI1G22670.1
Download sequence
Identical sequences I1GSR6
XP_010236032.1.954 XP_010236034.1.954 EG:BRADI1G22670.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]