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Domain assignment for EG:BRADI2G20360.2 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI2G20360.2
Domain Number 1 Region: 11-40,197-341,380-435,467-549,623-645
Classification Level Classification E-value
Superfamily Pseudouridine synthase 2.16e-88
Family tRNA pseudouridine synthase TruD 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI2G20360.2   Gene: BRADI2G20360   Transcript: BRADI2G20360.2
Sequence length 658
Comment pep:novel chromosome:Brachy1.0:2:17878799:17884726:-1 gene:BRADI2G20360 transcript:BRADI2G20360.2
Sequence
MARSSSVTEPEVGITCFTSSLPGFRGVLKHRYSDFIVHEVARDGSVVRLTSFDLPDECVD
VKEEEKAAPPADADHSQALESFHALSTDADCDALKGLLERVSAGGDSGFSPVILSPDADK
AHRSEVHNFFKKNFKFLVTDTVEHSDGVKKCIRVRVGSEAGGGRGSRGRGGGGRGKKRKN
MNGSDWRDDTPFDRRGSTNWPPHIGKFLRFHLCKENKDTQDALGVIGKMLGLQPRAFGFS
GTKDKRAVTTQQVTVFKVPANKLAALNKRLFGIKVGNFCYVKEGLGLGQLMGNRFTITLR
GVVAESEGVIKAAVDSLGKNGFINYYGLQRDDIKKVREHYKEHGDIDMALRNFPRHLVAE
KAILQCLRKCPENYLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVQKYGISQVIEGDLI
YSKESHPGEATSVGTSETDDDHANSSEIDICSETLPEENIQSVKIVDSEDLLKGIYSFED
VVLPLPGSQALFPGNEVAEIYHEMAKKDGISLTGSAHGVKEFSITNMKGSYRRVFQRPID
FEWELMKYTDESASLAETDMDILSKVKLTEAKANEPGSSGVSNSKPADCKLESPSENSMP
TSETSLGENKSNGSSDISPSKLAVKLAFTLPASTYATMAIRELLKNPTSVAYQKTLDC
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Identical sequences I1HHT9
EG:BRADI2G20360.2 15368.BRADI2G20360.1

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