SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for EG:BRADI1G72430.3 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI1G72430.3
Domain Number 1 Region: 38-252
Classification Level Classification E-value
Superfamily L domain-like 1.43e-38
Family Internalin LRR domain 0.082
Further Details:      
 
Domain Number 2 Region: 402-533
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.29e-24
Family Protein kinases, catalytic subunit 0.0029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI1G72430.3   Gene: BRADI1G72430   Transcript: BRADI1G72430.3
Sequence length 533
Comment pep:novel chromosome:Brachy1.0:1:70166554:70170378:-1 gene:BRADI1G72430 transcript:BRADI1G72430.3
Sequence
MGRRRRGGGMLDAPWLPLLLLVCCAWPQKQILVSADTNANDVTVLNTLFTSLNSPGQLKG
WQASGGDPCGQSWQGITCSGSSVTAIKLPSLGLSGNLAYNMNTMGSVVEIDMSQNNLGGG
QAIQYNLPTDKLERLNLAGNQFTGNLPYSIFSMSKLKYLNLNHNQLQGKMTDVFSNLDSL
TTVDLSFNSLTGDLPDSFTALSSLKTLYLQNNQFSGSINVLANLPLTDLNIANNRFTGWI
PSQLKKINSLQTDGNSWTSGPAPPPPPYTAPPANRRKSPGQKNDGSSSSGGKSGIGGGGV
AGIIISLLVVGAVVAFFVIRKRKRKATMEEHFEQHQPFTSFPSNQVKDVKPFEESATIDV
ESLASPASASLKLPPKIERHKSFDDDDFSNKPVPKKSNAKPIKATVYSVADLQIATDSFS
MDNLVGEGTFGRVYRSQFNDGKVLAVKKLDSTVMPFHSSDDFVELVSNISKLHHPNLNEL
EGYCMEHGQHLLVYHFHRNGSLHDLLHLSDEYSKPLSWNSRVKIALGSARALE
Download sequence
Identical sequences I1H8Y7
EG:BRADI1G72430.3

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]