SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for EG:BRADI2G02750.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI2G02750.1
Domain Number 1 Region: 176-507
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.31e-35
Family WD40-repeat 0.0051
Further Details:      
 
Weak hits

Sequence:  EG:BRADI2G02750.1
Domain Number - Region: 83-126
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0259
Family Retrovirus zinc finger-like domains 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI2G02750.1   Gene: BRADI2G02750   Transcript: BRADI2G02750.1
Sequence length 570
Comment pep:novel chromosome:Brachy1.0:2:1945342:1949351:-1 gene:BRADI2G02750 transcript:BRADI2G02750.1
Sequence
MATRARFVHNSRRRRGDEESSSDDEQQQVESSSSDDNEEEEEEEEGPGQVVADEEEEPAA
VESPSPAAGRNGRKGPITISLKKVCKVCKKTGHEAGFKGAVYIDCPMKPCFLCKMPGHTT
LTCPHRVAMEHGVIPAPRRNTNTSLDYVFQSQVKGKIPMVKPQFLVPNQLECGNIKFHQR
RVTCLEFHPTKNNVLLSGDKKGLLGIWDYVKLHEKITYDSVHSCILNSMKVDAANDGVLY
TASSDGTISCTDLDTGLGSPLLNLNPDGWNGPNTWRMIYGMDLNTEKSLLLVADSFGFIY
LLDRRSKTRVGQPILIHKKGSKVTGLHCNPAQPDILLSSGNDHYARIWDTRKLEPNSSLA
SLAHGRVVNSGYFSPRSGNKILTTCQDNRIRVWDYIFGNLESPSREIVHSHDFNRHLTPF
KAEWDPKDYSESVAVIGRYISENYNGAALHPIDFIDTSSGKLLAEVMDPDITTISPVNKL
HPQDDILATGSSRSIFIWKPKTGVDHTEERTSQKVKEYVYGSGSQKKANGKHDNSSDDDS
DGGCDGKKKKAKKTRFTHTAKGKEKGKSKV
Download sequence
Identical sequences I1HBV8
15368.BRADI2G02750.1 EG:BRADI2G02750.1 XP_003568393.1.954

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