SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI2G04210.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI2G04210.1
Domain Number 1 Region: 41-290
Classification Level Classification E-value
Superfamily WD40 repeat-like 2e-29
Family WD40-repeat 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI2G04210.1   Gene: BRADI2G04210   Transcript: BRADI2G04210.1
Sequence length 418
Comment pep:novel chromosome:Brachy1.0:2:2940612:2944795:1 gene:BRADI2G04210 transcript:BRADI2G04210.1
Sequence
MSSQVSTSRGLHPPGKIMTFESPHTWPLSGPTSQAEAGSGDDQEVRLLSVSWNQDFGCFA
AGTSNGFRIFNCDPFKETFRRDLKSGGFGIVEMLFRCNILALVGGGSNMQYPPNKVMIWD
DHQSRCIGEFAFRSDVRAVKLGKDYIVIVLETKIYVYNFTDLKMLHQIETLPNPKGLCYL
SHHANTSVLACPGLRQGHVRVEHFGLKVTKMIAAHDSHISCMALTMDGLLLATASVKGTL
IRIFNTMDGSRLQEVRRGLDKAEIYSIALSSNVQWLAVSSDKGTVHIFSLKVRVAGEDAS
NDQRTLEAPRMDHQNSSSSMDPLIQTNMGSNASSSLSFMKGILPKYFSSEWSFAQFHLPE
VTRYIVAFGAQNTVMMVGLDGSFYRCVFDQVNGGQMSQKEYSRFLKTDYAPSMRTLSV
Download sequence
Identical sequences I1HCD3
15368.BRADI2G04210.1 EG:BRADI2G04210.1 XP_010230495.1.954

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]