SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI2G10377.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI2G10377.1
Domain Number 1 Region: 663-918
Classification Level Classification E-value
Superfamily Fucose-specific lectin 2.22e-19
Family Fucose-specific lectin 0.03
Further Details:      
 
Domain Number 2 Region: 110-394
Classification Level Classification E-value
Superfamily Fucose-specific lectin 0.0000000000017
Family Fucose-specific lectin 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI2G10377.1   Gene: BRADI2G10377   Transcript: BRADI2G10377.1
Sequence length 929
Comment pep:novel chromosome:Brachy1.0:2:8627832:8635358:-1 gene:BRADI2G10377 transcript:BRADI2G10377.1
Sequence
MAMNGPSYRLLSWFLCFVACILMESAVSVHAWCPLHPNLRREAEFKQKTNKFWEYQEQSN
TWVEISMPFNLMSCINGTCTKVGSIEQPERKHGRASISSQEKDTDPVLPIRRRISLARMS
ESSVWVTGQSGSIYERFWNGVMWVIAPHELPTSAGYATATFIVNTTILALSEAGILYQLQ
LNEHAQPIWTEMTFTSEQHFTNLGEKTQSQATHIKNGIVSHNGRKLFLSIMNGSLLEVTE
LQPLRWNCHGRPPGADVSYISDAENARPGTVFTVSSTGDLYEFDKETKPSWKKHIWNEQT
TKNVSLSSSVGCVLHGLLGSNSVSLFLITKVFIDWQDGILVERRLHRRKWKWDKHGAPKS
QRLSSITEIQKDESNDATSMFFTTTTGKVFEYQFPKYTGGAQSNKIRGLWVNHMSPDHAE
VARNVRGLQVQVGRMIFQLDDGRLGELHLPGMGGGHFGPNQQNSIRRKVSNKYEWSILDT
PETEGWNADYCTEEHGPTNCITGAVNVAADTEPTNLSNAPPRRRKAEKKQHYLCVHSHDS
DETESYNILSRSIYLSFHMRVMHADRSLFLITDNGLTLEYLNSNGVWLWLRHEHTTAMKG
TLGSYNGSLYLVDVHGSLHIRERNGDELLWINCTAMRKGRQVASGAPWDGIPGLSRRVTT
DDALFFVNKRGRLLQFTVALRKFKWRDCHSPPDTKIAFIVDQEVFRRNIIFVVGRNGRMY
QYNRITELWHRHYQSPHLVLARSPGTAMRPSPLSLTGSIFMLSEHGGLVEYHFSPQDGWE
WIEHGTPHRDVTLVVAPGPCFDGAQLFVVGSDGQVYRRHLDKRTWGWTSHGHPSEPSTTA
PDMIGGREQSCAHAADAHYASSFRGSCDEKVAAVRPVPFSEDAVVFELRDGRLAELRRAA
EGRGGWEWARIIGTPASACMTSYWTAVAT
Download sequence
Identical sequences I1HEF8
EG:BRADI2G10377.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]