SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI2G40627.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI2G40627.1
Domain Number 1 Region: 301-598
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 1.48e-73
Family Protein kinases, catalytic subunit 0.0001
Further Details:      
 
Domain Number 2 Region: 168-214
Classification Level Classification E-value
Superfamily LysM domain 0.0000000366
Family LysM domain 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI2G40627.1   Gene: BRADI2G40627   Transcript: BRADI2G40627.1
Sequence length 620
Comment pep:novel chromosome:Brachy1.0:2:40940223:40943660:1 gene:BRADI2G40627 transcript:BRADI2G40627.1
Sequence
MARHSSLFFFFFLALFVQHLHAVVSLPTLPRRSLEPAAEQWQPMQCAPQSLIPSCNSYLY
VTPQGRSLSEIASDFKGNASLIQPIKRLSGSEDLLIPVPCMCEAINATVNALFHDTGYEA
IQNDISDDINSNKFSGLAWNLTAGLNKGDTITVHLLCGCSSTAPEGVLSYTVQPEDTLSN
IATLFSSGSREILSLNPAVRNPDFIKPGWVLFIPMGVAASSNKKIGGLPIIIAVSISAAV
SLLCMSIIILRLKRRSPLPSVEAPKNKMEKVPSNTSIAILESRYFPSKRIDEIDPFQTER
PVIFSLKEVGDATVNFDEKRKIGEGGYGMVYLGFIGTHEIAVKKMKASKSKEFFAELKVL
CKVHHINVVELIGYAAGEDHLYLVYEYVRNGSLSEHLHDPLLKGHQPLSWTARTQIAMDA
ARGIEYIHDHTKACYVHRDIKTSNILLDDGLRAKVADFGLVKLVERSDEDDCLATRLVGT
PGYLPPESVLELHMTTKSDVYAFGVVLAELITGLHALVRDNKEANKTKSLISIMRRAFKS
EYLESSLEKIIDPSLKDNYPIEEVCKLANISMWCLSEDPLDRPEIREIMPVLSQIHMTSI
EWEASLGGDTEVFSGVFNGR
Download sequence
Identical sequences I1HNE9
XP_010233416.1.954 EG:BRADI2G40627.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]