SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI2G55650.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI2G55650.1
Domain Number 1 Region: 4-168,196-237
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.04e-58
Family WD40-repeat 0.00012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI2G55650.1   Gene: BRADI2G55650   Transcript: BRADI2G55650.1
Sequence length 245
Comment pep:novel chromosome:Brachy1.0:2:54209055:54210566:1 gene:BRADI2G55650 transcript:BRADI2G55650.1
Sequence
MLTKFETKSNRVKGVAFHPRRPWILASLHSGVVQMWDYRMGTLLNRFDEHDGPVRGVHFH
KTQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHDEHPWIVSASDDQTIRIW
NWQSRTCVAVLTGHNHYVICASFHPKEDLVVSASLDQTVRVWDIGALRKKSVSPADDIMR
LTQMNTDMFGGIDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNGSTMTS
FFLAA
Download sequence
Identical sequences I1HTL8
15368.BRADI2G55650.1 XP_014753902.1.954 EG:BRADI2G55650.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]