SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI3G13280.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI3G13280.1
Domain Number 1 Region: 10-373
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.58e-53
Family WD40-repeat 0.00074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G13280.1   Gene: BRADI3G13280   Transcript: BRADI3G13280.1
Sequence length 503
Comment pep:novel chromosome:Brachy1.0:3:11782396:11787921:1 gene:BRADI3G13280 transcript:BRADI3G13280.1
Sequence
MRGGTVQINWHDQQPVLTLDFHPASRRLATGGGDHDIKIWAIASDDSDQKLPSASYVSSL
SAHSSAVNVLRFSPSGENLASGADGGGITLWKLHTTDDGEAWKVHRSLLFHRKDVLDLQW
SSDGSFLVSASVDNSCIIWDANKGAVQQMLEGHLHYVQGVAWDPLGQYIASLSSDRTCKI
YANKPQGKSKNVEKMNFVCQHTLVKAEHQSHDESKPPVKTHMFHDETLPSFFRRLAWSPD
GSFLVLPAGLCKYSSEVINTAYVISRRDLSRPAIQLPGASKAIVAVRFCPILFSLRGSHS
DGLFKLPYRAVFAVATLNSLYVYDTESAAPILIHAGLHYAAITDVSWSSDAKYLALSSRD
GYCTIIEFENEELGHPHILPGKKEVPEGNVTCKNTKPLTVGSMEVDVGTSKVKTAACPVD
ITTPPPALAKNSTLGTKEVTEGNATCEQAKPSKVDSMEVDVGASNAKMEANPVSVEVTPP
PASTKNSTSSKPNKKRITPIAIN
Download sequence
Identical sequences I1I0C4
XP_003573270.1.954 15368.BRADI3G13280.1 EG:BRADI3G13280.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]