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Domain assignment for EG:BRADI3G28280.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI3G28280.1
Domain Number 1 Region: 220-510
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.34e-63
Family WD40-repeat 0.00011
Further Details:      
 
Domain Number 2 Region: 1-51
Classification Level Classification E-value
Superfamily RING/U-box 0.000000000000238
Family U-box 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G28280.1   Gene: BRADI3G28280   Transcript: BRADI3G28280.1
Sequence length 527
Comment pep:novel chromosome:Brachy1.0:3:29588572:29595410:-1 gene:BRADI3G28280 transcript:BRADI3G28280.1
Sequence
MICAISGEVPEEPVVSKSSGLLFERRLIERYIEDHGKCPVTKQDLSMDDIVLVKTNKVVK
PRPLQAASIPGLLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDESRALLALAERQIPASMAGDVPAAVVSNGKRAMEDEIGPDGKKIRPGINPVMIDELT
ECNTMLSAQRKKRQVPPSLAQIDALERYTQISSHPLHKTNKPGILSMDIHPSKDIIATGG
IDTNAVLFDRPSGQILSTLSGHSKKITTLKFVPRDELVVTGSADKTVRIWQGSEEGNYNC
IHTLKDHTAEIEAVTVHATQKYFVTAARDNTWCFYDISTGYCLSQVGEASGLEGYTSASF
HPDGLILGTGTTDAAVKIWDVKTQSNVAKFEGHAGPVTAMSFSENGYFLATAALDGVKLW
DLRKLRNFRTFSPYDSDTPTNSVEFDFSGSYLAVAGSDIRVYQVANVKTEWNLIKTLPDL
SGTGKVTSAKFGADSKYIAVGSMDRNLRIFGLPGEDQMDDDAKPSAE
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Identical sequences I1I4J3
EG:BRADI3G28280.1 XP_003574025.1.954 15368.BRADI3G28280.1

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