SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI3G29861.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI3G29861.1
Domain Number 1 Region: 4-230
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.01e-51
Family WD40-repeat 0.00017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G29861.1   Gene: BRADI3G29861   Transcript: BRADI3G29861.1
Sequence length 742
Comment pep:novel chromosome:Brachy1.0:3:31916453:31922429:-1 gene:BRADI3G29861 transcript:BRADI3G29861.1
Sequence
MIGAGAASGTIKIWDIEEAKVVRTFTGHRSNCVSLDFHPFGEFFASGSSDTNMKIWDMRK
KRCIHTYQGHTRRIDVLRFTPDGRWIVSGGADNSVKIWDLTAGKLLHDFTLHEGPVNCLD
FHPHEFLLATGSADKTVKFWDLETFELIGSSGPENCREYYEPASVVRSMTFNSDGKALFC
GLHESLKVLSWEPIICHDVVDVGWSTLADLNVQEGKLLGCSYNQSCVGIWVVDLTRIEPY
AVGNAEAHLNESGNGPIQADSSIPSILGRLSVSRIPAANEISSNTLLKRSMSASNEIHLP
ASSSVTNRLSKAPGRTDLRLTRADSAPLLSPRGKLNPNSTDDQKRKTSNVRTKVYPSTSA
RMFTDNSQASAAPSYRPRSTTSACSSKGSSFVPVVPRHSSKVDAGPNLSEAASTDIPVVE
PENLLKGRVAVDNGKEMRQCVFQSKPITSEGKFIRQTSGDGDINCFGTMCTESVVPNEVG
DRYDVSGSEEIKSVVGRNPEFVDVNRTAFFRLHRLVESSESSIVERRGAGPSCASYGRSH
YTSMLDGLRRQSSFGSEQSASANDEDVIADLMKKHQEFIHGMKPRLTKLELVYQCWQNND
IKGSVNAVQRMLDHAVTADIISVLMESTTECITLDICTSVLPLASNLLESIYERHLNIAL
GMILKLVKSFGPTICSTLSAAPPVGVDLEAEQRFERCHSCFQELKKVNSVLISLTRRQGN
VGRSARKLSLFLQDIFKLPSSV
Download sequence
Identical sequences I1I523
XP_010234861.2.954 EG:BRADI3G29861.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]