SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI3G42750.2 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI3G42750.2
Domain Number 1 Region: 495-649
Classification Level Classification E-value
Superfamily Cyclophilin-like 4.38e-69
Family Cyclophilin (peptidylprolyl isomerase) 0.000000536
Further Details:      
 
Domain Number 2 Region: 89-320
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.66e-30
Family WD40-repeat 0.007
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G42750.2   Gene: BRADI3G42750   Transcript: BRADI3G42750.2
Sequence length 652
Comment pep:novel chromosome:Brachy1.0:3:44204249:44209454:1 gene:BRADI3G42750 transcript:BRADI3G42750.2
Sequence
MATTSDPTADPALPTETAEGDAVQEQEHGNGAAAAPAVVLQQQGQGEEEEELIGPGPAPA
RQRQKRPLQFEQAFLDALPSAAMYEKSYMHRDVVTHVAVSPADFFITGSADGHLKFWKKK
PSGIEFAKHFRSHLSPIEGLAVSVDGLLCCTISNDRSVKIYDVVNYDMMFMMRLPFVPGA
IEWVYRQGDVKPKLAVSDRNTSFIHVYDTHSGSVDPVISKEIHSGPVKVMKYNHAQDVVV
SADAKGLLEYWSPSTLKFPEDVVNFRLKTDTNLFELAKCKTSVSAIEVSNDGTQFAVTSP
DRRIRVFWFKTGKLRRVYDESLEVAQDLQKSDVPLYHLDAIDFGRRMAVEKEIEKTENVP
QPNAVFDESSNFLIYATLLGIKVVNLHTNKVSRILGKVENNERFLRIALYQGDKGNKKVR
KIPSIAANVNDSKEPLSDPTLLCCAFKKHRIYTFSRREPEEPEDATKGRDVFNEKPPPEE
LLSVSELGKTATTSLPDNLVFHTSMGDIHLKLYPEECPKTVENFTTHCRNGYYDNLIFHR
VIKGFMVQTGDPLGDGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFIT
TVATPWLDNKHTVFGRVVKGMDVVQQIEKVKTDKNDKPYQDVKILNVTVPKT
Download sequence
Identical sequences I1I9F1
15368.BRADI3G42750.2 XP_003574923.1.954 XP_010235404.1.954 EG:BRADI3G42750.1 EG:BRADI3G42750.2 EG:BRADI3G42750.3 EG:BRADI3G42750.4

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]