SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI3G44270.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI3G44270.1
Domain Number 1 Region: 46-99
Classification Level Classification E-value
Superfamily F-box domain 0.00000000235
Family F-box domain 0.012
Further Details:      
 
Weak hits

Sequence:  EG:BRADI3G44270.1
Domain Number - Region: 253-399
Classification Level Classification E-value
Superfamily Calcium-dependent phosphotriesterase 0.00288
Family SGL-like 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G44270.1   Gene: BRADI3G44270   Transcript: BRADI3G44270.1
Sequence length 886
Comment pep:novel chromosome:Brachy1.0:3:46050309:46058153:-1 gene:BRADI3G44270 transcript:BRADI3G44270.1
Sequence
MVHLRTTFLLLLLLTRSPFTFLGLDLAFLLQMAKRKRSKKGWSEERSCPTARLTSDLFIE
IISRLPVKAVGRAKCVSKTWRNLIQHPDHRSKLPHALAGFFYNRYNDSVERLPSTMPNFT
NVSGDVCPFNCPSFDFLPIHQRIELLDCCNGLLLLRLFDNQDADAFSYVVCNPATKNWTA
LPNSIQSRVKLCIVRLGFDPAVSSHFHVFEFLEDEYEYDITGLGVYSSEKSEWVYTEEIG
SGDDIIRLLHDNSPSIFVNGCLHFVTMEPAVVAVDTKGKTWRIIRAPDGGSDDEEAGMGH
GFIQHSQGCLHYSNLERHGEGIQLVVYVLMEYGSQDWILKHSIDLSYLFDWRRVDLLVDF
NWVAIHQECNLIFFTAGPDNTLMSYDMDRQQVRVMQSLGHDSGTHYLLAYDSTQFMAARR
TSWYQLAHLELEFMLVNPPFLKGEYDVCLAAVWSPEQQIKGFFLPAVCLATVAVQEANGS
YASSKSCESSWNQNCVLTEPWSLQYKGTRTELDNIRFRVRNFCCNRYFGCHKGLFQKIYS
SSYLLFASIHNNQSFILSYGFAGLFLKFFVNRSEMWWPEVLPLVKLLRTFHVEERSKENL
SGVKFFFLVFVISFSYYIVPSYFFPSISSLSFVCWIWKRSVTVQQLGSGLNGLGVGSFGL
DWSSVTGFTGSPLMFPFFVIANTMAGFILFMYIVIPFAYWTNSFKAKSFPIISTEVYDVY
GGRYDMSRVLDERYSTFSWQHSDVVVCSASIPMIGLTVFTCEGFGNELQLPYWGVILAFL
LVLLFVPPLAALRATVAQQPFTELFAHIIIGYLCPGRPLANVVFELYSSRTIEAALEVLS
TFKLGFYMKIPPREMFFAQLSLPVLGKLHFGAATLKDDAENSVLPS
Download sequence
Identical sequences I1I9Z7
EG:BRADI3G44270.1 15368.BRADI3G44270.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]