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Domain assignment for EG:BRADI3G56517.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI3G56517.1
Domain Number 1 Region: 188-505
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.02e-24
Family WD40-repeat 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G56517.1   Gene: BRADI3G56517   Transcript: BRADI3G56517.1
Sequence length 1374
Comment pep:novel chromosome:Brachy1.0:3:56370109:56377949:1 gene:BRADI3G56517 transcript:BRADI3G56517.1
Sequence
MASPAGNPNPNPNNPNPPFEVSMLFRPPHNPAPTASPIFPGAAGPPPPSGPYSYPPATPP
FHRGPYLHYAQDPQPPMPRPAMSFPMANPNLNPSANPGVSPAPNPGARLMQLLGNSGGSG
HLESAVSLPPPSSEFAATLPPPLPAMPSAPPARMLSSTSSKVPRGRLLGRGDKAVHNVDS
RLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALRSLL
RGHTQRVTDMAFFAEDVHRLASASVDGRIYVWRIDEGPDEENKPQITGKIEIAIQIVGDA
DSYHPRICWHSHKQELLFVGIRNCVLRIDTTKVGRGRDFSAEEPIKCHLDQLIDGVRLVG
KHDGDVTDLSISQWMTTRLASGSKDGTVKIWDDRKSVPLSILKPHDGQAVYSVAFLTAPE
RPHHINLITAGPLNQEIKIWASTNEEGWLLPSDSESWNCTQTLELVSSLEPRAEEAFFNQ
VAVLPQASIILLANAKKNAIYAVHVEYGPDPASTHLDYIADFTVAMPILSLTGTHESQPD
GEQVVQVYCVQTMAIQQYGLELSLCSPPSDTTGLGRDPAISRVYEASLEGVGAESSMGTS
IADSYTVGASSKQSTSDQSTDLDHKASAPPLTYTEGDGSAHIPSAPLASSMDLAGSGPPL
GNSDKDQSDFDYSKNRNIEPVTLTRQDTPMPKPLALTRQDTPMPKPLALTRQDTPMPKPL
ALTRQDTPMPKDNLGKDELRDNHSDVKLPPNPRMMFKVGGNATHLITPSEIISGALSTAD
SNQVSKSDGAKIQDGSISSPRIAEVEAKHVNESKPDHDLEPEAVKEAQVCESSKKAQNSL
EQTVEMISERSVTTDKYSVEESRSASDKLVPEHTGATGENVSNKTVEIPVKSDYPSASRE
QSSSYIKEKEKVLHPQASGQSSPSTSAFNSTESSHEPFSSSYPPIDSSPEVADMQAMMQQ
LVAMQKDMQKQLGTIVTAPIAKEGKRIETSLGRTMEKSVKASIDALWARFLEENTKREKA
ERERMQQMTTLITNSISKDIPAMLEKSIKKEASSLGPIIARTITPIIEKSLASIVADSVQ
KAVGDKVVNQLDKSVSAKLEATLARQIQLQFHTSVKQNLQDALRTSFESLLVPAFEQSCK
TMFEQVDSAFQKGMSEHAVGIQQQVEAAHTPLVLTLKESIASASSITQSVTSELLDGHRK
LLALVASGNFKAQNTNVLQPNNGPITGPPEVEAPLDPMKELGRLISERKFDEAFTVALQR
SDVSIVSWLCSQVDLRALCTMVPVPLNQGVLLALLQQLAVDIGTETSRKIQWMTDVAMAI
NPTDLVIAQHVRPIFDQVYAKLAHHRSLPSTSPSDSSNLRLLMHVINSVLLSYK
Download sequence
Identical sequences I1IED1
EG:BRADI3G56517.1 XP_010236011.1.954

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