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Domain assignment for EG:BRADI3G57667.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

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Strong hits

Sequence:  EG:BRADI3G57667.1
Domain Number 1 Region: 380-679
Classification Level Classification E-value
Superfamily WD40 repeat-like 7.07e-53
Family WD40-repeat 0.00019
Further Details:      
 
Domain Number 2 Region: 52-118
Classification Level Classification E-value
Superfamily RING/U-box 1.35e-18
Family RING finger domain, C3HC4 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI3G57667.1   Gene: BRADI3G57667   Transcript: BRADI3G57667.1
Sequence length 684
Comment pep:novel chromosome:Brachy1.0:3:57354772:57360936:1 gene:BRADI3G57667 transcript:BRADI3G57667.1
Sequence
MGDSSVPGALVPTVPKPEPARSGDGSAAAQAVVEEEEEQALADGEAAAAAGAPDGDLLCP
ICMGVIKDAFLTACGHSFCYMCIVTHLGHKSDCPCCGNYLTKAQLYPNFLLDKVVKKMSA
RQIAKTASPVDQFRHVVQQGNDMTVKELDSLMTLIAEKKRQMEQQESETNMQILLVFLHC
LRKQKLEELNEIQTDLQYIKDDISSVERHRLDLYRTKERYSMKLRMLLDEPAASKMWSSP
TDKPSSLFASNSRAPLSASSQGGLQNRRLDLRHQANHQGFQRREALASSDPPNPPMQSGN
VIARKRRVQAQFNELQEYYLQRRRNGAQSRRQEERDTVMMNKEGYHAGLDDFQSVLTTFT
RYSRLRVIAELRHGDLFHSPNIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDVH
CPVVEMATRSKLSCLSWNKYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHEKRAWSVDF
SRTEPSMLVSGSDDCKVKVWCTKQEASAINIDMKANICSVKYNPGSSYYVAVGSADHNIH
YFDLRNPSTPLHIFGGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENCPVRTFRGHKN
EKNFVGLSVSNDYIACGSETNEVFVYHKAISKPASSHRFVSSDVDDADDDPGTYFISAVC
WKSDSPTMLTANSQGTIKVLVLAP
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Identical sequences I1IER3
EG:BRADI3G57667.1

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