SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI4G40690.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI4G40690.1
Domain Number 1 Region: 67-419,451-530
Classification Level Classification E-value
Superfamily PLP-dependent transferases 4.08e-59
Family Cystathionine synthase-like 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI4G40690.1   Gene: BRADI4G40690   Transcript: BRADI4G40690.1
Sequence length 635
Comment pep:novel chromosome:Brachy1.0:4:45019791:45022073:1 gene:BRADI4G40690 transcript:BRADI4G40690.1
Sequence
MESSGKGAMSATLLSLFGGMSTASDKHSAPAAYDDDDNDDDSKISWLRSQLIGKDAEFTT
PFGRRLLTYADQTASGRSLHYIEDYLINEVLPFYGNTHTEDSHVGSKTTRLVSKAARYVK
RCTGAGPGDALIFSGAGSTAAIKRLQEIIGVALPSVEMRERVRAGMREEERWVVFVGPYE
HHSNLLSWRQSLAQVVEIGVDKDGLVDVGALRRALGSQEYANRPMLGSFSACSNVTGILT
DTRELARVLHRHGAFACFDFAASGPYVKIDMKSGEIEGYDAVFLSPHKFVGGPSTPGILL
MNKSLYKLSSQPPSTCGGGTVSYVNGFNEDVRENQKTKYTLYYDDIEEREDAGTPPIVQK
IRASLAFWVKEHVGYDTMGLRERVYSEMAMKRLLQNPNVRVLGNTSVERLPIFSFLIYPA
VPDSLFHGFDHESCGYDELLENARRKQQLPLHGRFVTRLLNDLFGIQARGGCACAGPYGH
LLLDVSKELSLRLRSAILQGYRGLKPGWTRLSFSYYLSKDEFKFILSAIEFIAAYGHRFL
PLYRFDWITGDWTFRKQAIKYHIMKEELSLGAEPLKRQDGLAKVADKFEKFEGNHKRFGS
YLEIAKKIALSLPDIKQQIVSVPKGVDPDLVLFHF
Download sequence
Identical sequences I1ITS1
15368.BRADI4G40690.1 EG:BRADI4G40690.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]