SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for EG:BRADI5G15180.1 from Brachypodium distachyon

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  EG:BRADI5G15180.1
Domain Number 1 Region: 48-346
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.37e-33
Family WD40-repeat 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: EG:BRADI5G15180.1   Gene: BRADI5G15180   Transcript: BRADI5G15180.1
Sequence length 354
Comment pep:novel chromosome:Brachy1.0:5:18558321:18560437:1 gene:BRADI5G15180 transcript:BRADI5G15180.1
Sequence
MDLGSFHLGGNADVVEFCPHRPFRHILAAATYTLQEQVTEEQQQDRAGTVSLFSVDAGAE
DESQRLRLLHTVDTAGVFDMKWSPTAPLLAQADAHGRLVLRRLEQEDGSDKGVVLTDVCS
GDVSSSMCLYVDWNQNADSLSVGLSDGSLSVISMREDCLEVSEHWTAHQYEVWTCYFDRA
RPHLLYSGSDDCSFSCWDLRESPSNAVFRDKKSHSMGVCCIAQNPLDGNMLLTGSYDEFL
RVWDMRSMVKPVNEKSLNLGGGVWRMKYHPSIADVVLSACMHNGFAIVKVGAGDATVMET
YCKHESLAYGADWQTSEAPEHSTASSVIATCSFYDRLLRVWQPEELVKHPGFKS
Download sequence
Identical sequences I1IZH2
XP_003581405.1.954 XP_010240114.1.954 XP_014751353.1.954 15368.BRADI5G15180.1 EG:BRADI5G15180.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]