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Domain assignment for Bra000564 from Brassica rapa Chiifu-401 1.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Bra000564
Domain Number 1 Region: 329-427
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 8.44e-23
Family B3 DNA binding domain 0.0068
Further Details:      
 
Domain Number 2 Region: 643-743
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.55e-16
Family B3 DNA binding domain 0.0096
Further Details:      
 
Domain Number 3 Region: 485-572
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.9e-16
Family B3 DNA binding domain 0.0042
Further Details:      
 
Domain Number 4 Region: 153-238
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.00000000000000167
Family B3 DNA binding domain 0.0059
Further Details:      
 
Domain Number 5 Region: 10-97
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000179
Family B3 DNA binding domain 0.0056
Further Details:      
 
Domain Number 6 Region: 771-834
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.00000373
Family B3 DNA binding domain 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Bra000564
Sequence length 1015
Sequence
MAKSTTLLSPQFFHTLLPGFQTHLTIPSDFFSNYIKDLETTTAELKSDSSLDITWKVKLT
GRILNDGWGDFAVANNLHIGNVVLVRYEGGIVFHVSDLGPCFSQIQHINPPRQNIDEEDD
VERERKGDESLIKKKLKPKQRPVSYSSYSPCHKRFVTFTLPPEYATLCRLTLPNLFVKEN
GISKPAEIRVLGKDGTKWPITLLLDKKGIMSFGKGWKEFVKANGLETGFTLKLMWEDTTP
SFSLCCPESASDRDEKECLESIKKQSLSIDRRIRDKPGKDDNNKEEKRSWERQKIHLRGR
DVGDFEEVPINKKVKTDSHGTEAAFSSLDNSCFVAFVTDSSLDSDTLYLPRYFTSSNGLT
RKCRKIVLIDGGGRSWAMDLSFNESSDIFYISPGWRSFCDKNGLQAGGFFTFKLVGNEET
PVLSFCPMESIDSRSQKDCFEAHSTEVSNEEEEIERERNEEETLMDIEEKKSKPEQRPVS
YSSYSPCYKRFITFTLPPDYATLDKLTLPKLFVKENGFNKPGEIYLLGKDGTKWLTRLLL
DKKGLMRLGKGWKDFVKANGLESGFTLKLIWEDATPSFSLCCAESTSDKNEEEYLETIMK
QSLSIDRRIRDKISKDENDKEEKRSWEREKINMRGRDSTTSRQKQFLTLAITPTSLRCNR
MRLPIPFLRKSCMDKPGVIYLLGKDDTKWMANLIQEGDGRMKLGKGWTAFAKENEFKAGE
SVTLESIWEDETPMIRFLRTESESSKANKKESIYMEDTESRTRDSSTEIHARFVTLTLKH
EDVKACMLILPSQFLKANGINKLGKITLLDENEVELSAYLLSREGIVAVESGWESQSQKK
RSTSLSCVLSLSNSTQTYKKTVTTSLPQSSSTKMVQSAMEKHTLSMPDWSLLPEELLHMI
SEMLVRIRLSLSFLPITPRESEDNMALPYRFQCSVKVELLFIVLNFQNLPKSFVRANGLE
TRCGDIVLMNEKVPMDSRLEISSLSNSSKEEEHCFYVSLPPTENPKKMRAQKLKK
Download sequence
Identical sequences M4C8N6
Bra000564

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