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Domain assignment for Bra010228 from Brassica rapa Chiifu-401 1.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Bra010228
Domain Number 1 Region: 289-391
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.71e-20
Family B3 DNA binding domain 0.02
Further Details:      
 
Domain Number 2 Region: 158-253
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.92e-19
Family B3 DNA binding domain 0.0033
Further Details:      
 
Domain Number 3 Region: 27-91
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000049
Family B3 DNA binding domain 0.0034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Bra010228
Sequence length 499
Sequence
MTIPPTFSLFHHRFITGDKPVLTVDDEFLRKHTKVLLISDSSDKIWKVKLDGSRLAGGGW
EEFAKAHSFRDGDLLVFRHDGDEIFHVSVSPRSDSCDISHHASPSLVDTDDVETDDDYSE
SDDGEDEYDDDDDGGEDDAGNIMVNKNTKAGFSCILRARVTPYSLIKDRLDLSKDFTVVS
FNEHNKPCEIDLVNEKGRKWTLRLSKNSTSGVFYIRQGWVNFCSANGLSQGDICKFKLSE
NGERPVLRLCPSSNSHEEEEECLEADAVKTSSIRGCSKEKRKGKKKNSPSQFLTVKLTPN
RLQTGQLYISSVFVNESGIKKSGEITLMNKDGRKWPSYLQMTGQCGSEWFYLRHGWREMC
KANGVKVNDSFVLELIWEDDNPVFKFCSKAENKGNGNGRLRKKRACETSIVETERRKRGR
PRVSNTNSSNLQRTRQESCSVSDQVASVKLSILDTLNTVRQFRADIEAREKNLEASSLEV
DALGERILGISQILNNNLV
Download sequence
Identical sequences M4D179
XP_009108916.1.100322 XP_013720407.1.73403 Bra010228

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