SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for Bra036478 from Brassica rapa Chiifu-401 1.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Bra036478
Domain Number 1 Region: 274-453
Classification Level Classification E-value
Superfamily NTF2-like 3.86e-49
Family TIM44-like 0.00049
Further Details:      
 
Weak hits

Sequence:  Bra036478
Domain Number - Region: 64-135
Classification Level Classification E-value
Superfamily Apolipoprotein A-I 0.00144
Family Apolipoprotein A-I 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Bra036478
Sequence length 462
Sequence
MASRKLIRDLLITRQPLFLRLAHQRRAGERLGGFMPAIGCSINRRFSIFSDFSKKIRGEA
ESNPEFQKTVKELKEKAEELKGVKEDLKVKTKEKTEQLYKQVDGVWTEAESVAKKVSSSV
KDTFSAATEEVKESFKLGKEENAESASSSGTGNSKEENHQQQQQSGTTEGGQHTLFEKIK
SSISSPLDIARKGIDIVKDELRGGTPKKKHLEYTPPPPFTGVKSTRTDLVVTPTKQSKWQ
KKWESLREKMQAHPAFKRLSGISEPVVNKSQEIAEDVVERWETSDNPIVHKIQDLNEAVF
NETDSGSTYKEIRRRDPSFSLTDFAAEVHEAIKPVLSAYSKGDAETLKKYCSPEVIERCT
AELAALKGHDLFFDHKILHISEVEVEETKMMGTIPTIIVRFQTQEIFCVRDKKGNIKEGG
QDTIHSVYYKWAMQQVEAGEESMYPIWRLRDICKLGAAQALI
Download sequence
Identical sequences M4F5X2
Bra036478 XP_009102019.1.100322

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