SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000002748 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000002748
Domain Number 1 Region: 350-536
Classification Level Classification E-value
Superfamily Cyclin-like 3.3e-66
Family Retinoblastoma tumor suppressor domains 0.0000416
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000002748   Gene: ENSCJAG00000001518   Transcript: ENSCJAT00000002900
Sequence length 554
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:20:7346343:7383594:1 gene:ENSCJAG00000001518 transcript:ENSCJAT00000002900 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQRLQGNDLHWLACALYVACRKSVPTVSKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKW
EDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQEEQPRQQRGRKQRRQPC
TVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFK
GLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVLEAKGIKEHFWKPYIRKLYEKKLLKGKE
ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFLGEDAEEEIGTLSRCLNTGSGT
ETAERVQMKNILQQHFDKSKALRISTPLTGVRYVKENSPCVTPVSTATHSLSRLHTMLTG
LRNAPSEKLEQILRTCSRDPSQAIANRLKEMFEIYSQHFQPDEDFSNCAKEIASKHFRFA
EMLYYKVLESVIEQEQKRLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGNFPFITE
IFDVPLYHFYKVIEVFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENR
VPTCEEVMPPQNLE
Download sequence
Identical sequences F7IQJ9
ENSCJAP00000002748

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]