SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000016914 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000016914
Domain Number 1 Region: 187-263
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 3.27e-16
Family HLH, helix-loop-helix DNA-binding domain 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000016914   Gene: ENSCJAG00000009234   Transcript: ENSCJAT00000017883
Sequence length 327
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:16:16943137:16944245:1 gene:ENSCJAG00000009234 transcript:ENSCJAT00000017883 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MERGLHLGAAAAGEDDLFLHKNLSASTRRLEAAFRSTPPGMDLLAPPPRERPTSSSSSPL
GCFEPADPEGAGLLLPPPGVPGLLVGSAGVGGDPTLSSLPAGAALCLKYGESASRGSVAE
SSGGEQSPDDDSDGRCELVLRAGVADPRASPGAGGGGAKAAEGCSNAHLHGGASVPPGGL
EKSKEQKALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYIL
MQAQALEEMRRLVAYLNQGQAISAASLPSSAAAAAAAAALHPALGAYEQAAGYPFSAGLP
PAASCPEKCALFNSVSSSLCKQCTEKP
Download sequence
Identical sequences F6UDW8
ENSCJAP00000016914

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]