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Domain assignment for ENSCJAP00000018726 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCJAP00000018726
Domain Number 1 Region: 36-242
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 1.09e-74
Family Nicotinic receptor ligand binding domain-like 0.00034
Further Details:      
 
Domain Number 2 Region: 243-431,557-584
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 4.06e-64
Family Neurotransmitter-gated ion-channel transmembrane pore 0.00000538
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000018726   Gene: ENSCJAG00000010168   Transcript: ENSCJAT00000019780
Sequence length 587
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:5:57324558:57335039:-1 gene:ENSCJAG00000010168 transcript:ENSCJAT00000019780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MELGGPGAQRLLSPLLLLLGAGLLRASGHVETRAHAEERLLKKLFSGYNKWSRPVANISD
VVLVRFGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWDPADYENVTSIRIPSELIWR
PDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFG
SWTYDKAKIDLVSMHSRVDQLDFWESGEWVIVDAVGTYNTRKYECCAEIYPDITYAFVIR
RLPLFYTVNLIIPCLLISCLTVLVFYLPSECGEKVTLCISVLLSLTVFLLLITEIIPSTS
LVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPRTHTMPAWVRRVFLDIVPRLLLMKR
PSVVKDNCRQLIESMHKMASAPRFWPEPEGEPPITSGTHSWHPPSPSFCVPLDTPADPGH
ACKSPSDPLPALQPPEAEKASPHPLPGPCRSSHSTQASGLAKARSLSVQHMSSPGEVAEG
ILRCRSRSIQYCAPRDDAAPEADGQAVGALASHKAHSAELPPPDQASPCKCTCRKEPPST
SSSATLKARSTKVLPRHLPLSPALTRAVEGVQYIADHLKAEDTDFSV
Download sequence
Identical sequences F7EPW1
ENSCJAP00000018726 ENSCJAP00000018726

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