SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000019446 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000019446
Domain Number 1 Region: 105-182
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 0.00000000000000589
Family HLH, helix-loop-helix DNA-binding domain 0.0000806
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000019446   Gene: ENSCJAG00000010451   Transcript: ENSCJAT00000020543
Sequence length 218
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:22:29169710:29178785:1 gene:ENSCJAG00000010451 transcript:ENSCJAT00000020543 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
DHNIQYQFRTETNGGQAVIQNPFSNGGSPAAEAVSGEARFAYFPASGVGDTTAVSVQTTD
QSLQAGGQFYVMMTPQDVLQTGTQRTIAPRTHPYSPKIDGTRTPRDERRRAQHNEVERRR
RDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKAGYIRELRQTNQRMQETFKEAERLQ
MDNELLRQQIEELKNENALLRAQLQQHNLEMVGESTRQ
Download sequence
Identical sequences F6TEH0
ENSCJAP00000019446

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]