SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000019888 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000019888
Domain Number 1 Region: 1781-1898
Classification Level Classification E-value
Superfamily Bromodomain 1.1e-35
Family Bromodomain 0.0002
Further Details:      
 
Domain Number 2 Region: 532-657
Classification Level Classification E-value
Superfamily DNA-binding domain 4.25e-24
Family Methyl-CpG-binding domain, MBD 0.013
Further Details:      
 
Domain Number 3 Region: 1666-1730
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 3.99e-18
Family PHD domain 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000019888   Gene: ENSCJAG00000010774   Transcript: ENSCJAT00000021017
Sequence length 1904
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:9:45424812:45443391:-1 gene:ENSCJAG00000010774 transcript:ENSCJAT00000021017 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EMEANDHFNFTGLPPAPAASGLKPSPSSGEGLYTNGSPMNFPQQGKSLNGDVNVNGLSTV
SHTTTSGILNSAPHSSSTSHLHHPSVAYDCLWNYSQYQSANPGSNLKDPPLLSQFSGGQY
PLNGILVGSRQPSSPTHNTNLRAGSQEFWANGTQSPMGLNFDSQELYDSFPDQNFEVMPN
GPPSFFTSPQTSPMLGSSIQTFAPSQEVGSGIHPDEAAEKEMTSVVAENGTGLVGSLELE
EEQPELKMCGYNGSVPSVESLHQEVSVLVPDPTVSCLDDPSHLPDQLEDTPILSEDSLEP
FNSLAPEPVSGGLYGIDDTELMGAEDKLPLEDSTVISALDCPSLNNATAFSLLADDSQTS
TSIFASPASPPVLGESVLQDNSFDLNNGSDAEQEEMETQSSDFPPSLTQPAPDQPSAIQL
HPAASPAISPAASPAVSLVVSPPASPEISPEVCPAASTIVSPVVFSVVSPASSAILSAVS
SEVPLTASVASPKASPVTSLAAAFPTASPANKDISNFPETTADQEEITGEGLTTSGSGEV
LRRRIATPEEVRLPLQHGWRREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNV
VHGVRREHFSFSPRMPVGDFFEERDTPEGLQWVQLSAEEIPSRIQAITGKRGRPRNTEKA
KSKEVPKVKRGRGRPPKVKITEVLNKTDNRLLKKLEAQETLSDEDKAKIGKSKKMRQKVQ
RGECQTTIQGQAKNKRKQETKSLKQKEAKKKSKAEKEKVKTKQEKLKEKVKREKKEKVKM
KEKEEVAKAKPACKADKTVATQRRLEERQRQQMILEEMKKPTEDMCLTDHQPLPDFSRIP
GLTLPSKAFSDCLTIVEFLHSFGKVLGFDPAKDVPSLGVLQEGLLCQGDSLGEVQDLLVR
LLKAALYDPGLPSYCQSLKILGEKVSEILLTRDNVSEILRCFLMAYGVEPALCDRLRTQP
FQAQPPQQKAAVLAFLVHELNGSTLIINEIDKTLESMSSYRKNKWIVEGRLRRLKTALAK
RTGRSEVEMEGPEEGLGRRRSSRIMEETSGMEEEEEEETIAAVHGRRGRRDGEVDATTSS
IPELERQIEKLSKRQLFFRKKLLHSSQMLRAVSLGQDRYRRRYWILPYLAGIFVEGTEGN
LVPEDVMKKETDSLKMAAHASLNPALFSMKMELAGSNTTASSPARARGRPRKTKPGSMQP
RHLKSPVRGQDSEQPQAQLQPEAQLHTPAQPQPQPQPQLQSHPQSHKGFLEQEGSPLSLG
QSQHDLSQSAFLSWLSQTQSHSSLLSSSVLTPDSSPGKLDPAPSQPPEEPEPDEAESSPD
PQALWFNISAQMPCNAAPTPPPAVSEDQPTPSPEQLASSKPMNRPSAASPCSPVQFSSMP
LAGLAPKRRAGDPGEMPQSPTGLGQPKRRGRPPSKFFKQMEQRYLTQLTAQPVPLEMCSG
WWWIRDPQTLDAMLKALHPRGIREKALHKHLNKHRDFLQEVCLRPSADPIFEPRQLPAFQ
EEILSWSPKEKTYATDLAVLQWVEELEQRVIMSDLQIRGWTCPSPDSTREDLAYCEHLSD
SQEDITWRGRGREGLAPQRKTTNPLDLAVMRLAALEQNVERRYLREPLWPAHEVVLEKAL
LSTPNGAPQGTTTEISYEITPRIRVWRQTLERCRSAAQVCLCLGQLERSIAWEKSVNKVT
CLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEGEFTQKPGF
PKRGQKRKSGYSLNFSEGDGRRRRVLLRGRESPQQYMEEGLSPSKRRRLSMRNHHSDLTF
CEIILMEMESHDAAWPFLEPVNPRLVSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAAD
ALLVFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEFYQGKQANL
Download sequence
Identical sequences F7BSX6
ENSCJAP00000019888 ENSCJAP00000019888

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]