SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000027854 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000027854
Domain Number 1 Region: 1322-1431
Classification Level Classification E-value
Superfamily Bromodomain 4.06e-36
Family Bromodomain 0.00015
Further Details:      
 
Domain Number 2 Region: 44-171
Classification Level Classification E-value
Superfamily DNA-binding domain 2.88e-22
Family Methyl-CpG-binding domain, MBD 0.018
Further Details:      
 
Domain Number 3 Region: 1203-1269
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 3.77e-18
Family PHD domain 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000027854   Gene: ENSCJAG00000015052   Transcript: ENSCJAT00000029434
Sequence length 1438
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:6:59418356:59747619:1 gene:ENSCJAG00000015052 transcript:ENSCJAT00000029434 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSLTAHSTPRNLHIAKAPGSAPAALCSESQSPAFLGTSSSTLTSSPHSGTSKRRRVTDER
ELRIPLEYGWQRETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRDNF
SFSAKIRVGDFYEARDGPQGMQWCLLKEEDVIPRIRAMEGRRGRPPNPDRQRAREESRMR
RRKGRPPNVGSAEFLDNTDAKLLRKLQAQVTKKLQKQEQARVAKEAKKQQETNVYRNSDE
TSIQAQAKKKKKEEAANAKLLEAEKRIKCERERRRQHMMLMKAMEARKKAEKVKLKEKER
LKQEKRDEKRLNKERKLEQRRLELEMAKELKKPNEDMCLADQKQPLPELPRIPGLVLSGS
TFSDCLMVVQFLRNFGKVLGFDVNIDVPNLSVLQEGLLNIGDSMGEVQDLLVRLLSAAVC
DPGLITGYKAKTALGEHLLNVGVNRDNVSEILQIFMEAHCGQTELTESLKTKAFQAHTPA
QKASVLAFLINELACSKSVVSEIDKNIDYMSNLRRDKWVVEGKLRKLRIIHAKKTGKKDT
SSGIDLGEEQHSLGTPTPGRKRRRKGGIKKTKKEKSLISVKERRGINTGEINDEGDQAAS
VEELEKQIEKLSKQQSQYRRKLFDASHSLRSMMFGQDRYRRRYWILPQCGGVFVEGMESD
FCPHQAWKKKYDVAKVGIRDKFNDLIPNRKIEIHNKNYDTLKLIRAMPRYLRFHPGSYKM
QKNQLKEDSRWCCENSPGLELSLNPRRGLEEIAKEREKLKMAESVQIKEEMFETSGDTLN
CSNTDHCEQKEDLKEKDNTNLFLQKPGSFSKLSKLLEVAKMPPESEVMTPKPNSSPNDQL
LKTLTEKNRQWFSLLPRTPCDDTSLTHAEMSTASLVTPQSQPPSTSPSPAPAPLGSSAQN
PVGLNPFALSPLQSLTPRRFWSITSSLPSLGSGLGLSEGNTQPAAVEVAKPVDFPSPKPI
PEEMQFGWWRIIDPEDLKALLKVLHLRGIREKALQKQIQKHLDYITQACIKNKDAIIELN
ENEENHVTRDIVENWSVEEQAMEMDLSVLQQVEDLERRVASASLQVKGWMCPEPASERED
LVYFEHKSFTKLCKEHDGEFTGEEENSAHALERKSDNPLDIAVTRLADLERNIERRYLKS
PLSTTIQIKLDNVGTVTVPAPAPSISGDGDGIEEDIAPGLRVWRRAVSEARSAAQVALCI
QQLQKSIAWEKSIMKVYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCP
ACIAKQIPLFFTQKNNQFLASGQTIKIKKLHVKGKKTNESKKGKKVTLTGDTEDEDSAST
IKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKL
SSGQYPNLETFALDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKFKQGQM
Download sequence
Identical sequences F7G453
ENSCJAP00000027854

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]