SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCJAP00000036266 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCJAP00000036266
Domain Number 1 Region: 248-442
Classification Level Classification E-value
Superfamily SMAD/FHA domain 9.32e-63
Family Interferon regulatory factor 3 (IRF3), transactivation domain 0.0016
Further Details:      
 
Domain Number 2 Region: 24-129
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.09e-43
Family Interferon regulatory factor 0.00012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCJAP00000036266   Gene: ENSCJAG00000019524   Transcript: ENSCJAT00000038300
Sequence length 451
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:4:28850142:28864247:-1 gene:ENSCJAG00000019524 transcript:ENSCJAT00000038300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MNLEGGGRGGEFGMSAVSCGNGKLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQ
DYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISD
PYKVYRIVPEGAKKGRGFPELGSASLPELCGSQVETPHKSSPVSQVHNYVMPPLDRSWRD
YVPDQPHPEIPYQCPVTFGHRGHHWQGPACENGCQVTGTFYACAPPESQAPGIPTEPSIR
SAEALALSDCRLHICLYYREILVKELTTSSPEGCRISHGHTYDPSNLDQVLFPYPEDNGQ
RKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCNDRPNKLERDQTCKLFD
TQQFLSELQAFAHHGRSLPRFQVTLCFGEEFPDPQRQRKLITAHVEPLLARQLYYFAQQN
SGHFLRGYDLPEHISSPEDYHRSIRHSSIQE
Download sequence
Identical sequences F7EID4
ENSCJAP00000036266 ENSCJAP00000036268

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]