SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Cucsa.136040.1|PACid:16963036 from Cucumis sativus v122

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Cucsa.136040.1|PACid:16963036
Domain Number 1 Region: 22-49,90-138,192-392
Classification Level Classification E-value
Superfamily Ankyrin repeat 1.24e-38
Family Ankyrin repeat 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Cucsa.136040.1|PACid:16963036
Sequence length 688
Sequence
MPPTYFPLRWESTGDQWWYASPIDWAAANGHYDLVRQLLRLDGNHLIKLTSLRRIRRLET
VWDDEEQFHDVAKCRSDVSRKLLMESESKKGKNSLIRAGYGGWLIYTAASAGDLGFVQEL
LQRNPLLVFGEGEYGVTDILYAAARSKNDGVFRILYDFAISPRFSTGRGGVLDEHIGEIP
AVYKWEMMNRGVHAAARGGNLKILKELLADCSDVLACRDAQGSTVLHAAAGRGQVEVLKY
LVQTFPIINSIDHQGNTALHIAACRGQLAAVEALIAASPSSISLRNNAGETFLHKAISGF
QTPAFRRLDRQIDLLKNVICGKVHNMDDIINARNNDGRTALHMAAIGNVHSDLVQLLMTT
GSIDLNVRDMDGMTPLDYLRQNTQSASADVLIRQLISAGGMFGCHDYNTRKAIASRLKMQ
GLGSSPGTSFRVSDTEILLYTGIENASDTIPDHGSAGMSSSSVELSPYDLPNENPNSSST
IKKSGSVNSAAQRLKSVFHWPRIKDKKKSETSKKQMDEGSIEESHKKYSSSDEAPTPTPL
RQRFSKPLTLPNHKRTLSVRSNQSSPSAKKKHATGLMRGVSQGMPHVVIPHRSRSSSFSK
SSLSSPGSVDKQKGICFDSDGAGPSYSNQAIGNETPNLGKQGSVDRKLRSQYFCFGAGSL
IGKTTVSKQQQQQQQQSQSYKLPVVSVM
Download sequence
Identical sequences Cucsa.136040.1|PACid:16963036

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]