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Domain assignment for clementine0.9_001661m|PACid:19270051 from Citrus clementina v165

Domain architecture


Domain assignment details

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Strong hits

Sequence:  clementine0.9_001661m|PACid:19270051
Domain Number 1 Region: 134-276
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 7.72e-47
Family B3 DNA binding domain 0.0041
Further Details:      
 
Domain Number 2 Region: 831-911
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000054
Family PB1 domain 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) clementine0.9_001661m|PACid:19270051
Sequence length 946
Sequence
MGSVEEKIKAGGLVIRAQTTLLEEMKLLKEMQDQSGARKAINSELWHACAGPLVFLPQVG
SLVYYFPQGHSEQVAASTKRSATSQIPNYPNLPSQLLCQVHNVTLHADKDTDEIYAQMSL
QPVNSEKDVFPIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTM
QPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQ
LMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAASNRSQFTIFYNPRACPSDFVIPL
AKYRKSVYGTQMSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWD
EPGCSDKQKRVSPWEIETPESLFIFPSLTSGLKRPFHSGILATETEWGSLIKRPLACPEI
APGVMPYSSISNLCSEQLIKMMLKPQLVNNPGSFAASSLQETSGAKGAHLEEVKTLQSTI
NQKPRLVPSEMNRIDNQNCSQICLNQADTVNSSLSRIHIPEKPHPPSKCEKQAPPGMNTD
HLKSEPRQSIEQSSNLTSAADCSMEKPSGPLNPQNLVNQHAFHNQNEGLLQLQSSWPMQS
QLESVFQAQQINVPQSDSTAHSGSLPILDTDEWMSHTSCNSLAGTYNRSPGPLPMFGLQE
PSTMLPEVINPSLSFPGQEMWDHQLNNLRFLSPVDPLTSFTQQDHCSLNSSGLRDLSDES
NNQSGIYSCLNIDVSNGGSTMIDHSVSSAILDEFCTLKDANFQNPPDCLMNTFSSSQDVQ
SQITSASLADSQAFSRQDFPDNSGGTSSSNVDFDESSLLQNTSWQPVVPPMRTYTKVQKT
GSVGRSIDVTNFKNYDELCSAIERMFGLEGLLNDPRGTEWKLVYVDYENDVLLVGDDPWE
EFVGCVRCIRILSPQEVQQMSEEGMKLLNSAAMQGIDCTKPEGGRA
Download sequence
Identical sequences V4TFD4
clementine0.9_001661m|PACid:19270051 XP_006435146.1.91645

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