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Domain assignment for clementine0.9_001909m|PACid:19286084 from Citrus clementina v165

Domain architecture


Domain assignment details

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Strong hits

Sequence:  clementine0.9_001909m|PACid:19286084
Domain Number 1 Region: 112-256
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.53e-48
Family B3 DNA binding domain 0.0061
Further Details:      
 
Domain Number 2 Region: 758-841
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.000000654
Family PB1 domain 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) clementine0.9_001909m|PACid:19286084
Sequence length 899
Sequence
MRLSTAGFSPQHQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKE
VDAHIPNYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLSPQEQKEAYLPAELGTLS
KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR
HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPPTVMPSSVL
SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTRVSVGMRFRM
LFETEESSVRRYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
TFPMYSSPFPLRLKRPWPVGLPAFHGIKDEDLGINSQLMWLRGDGDRGMQSLNFQGLGVT
PWMQPRMDASMLGLQNDMYQAMAAAALREMRAVDPSKPNAASLMQFQQPQNLPSRTSALV
QSQMLQQSHPQQTFLQGVQENQHQSQSQTHSQSHLLQPQLQHSHSFNNQQQQPLPQPQQQ
VDHQQIPSAVSAMSQFASVSQSQSPPMQAISSLCQQQSFSDSNGNPATNPIVSPLHSLLG
SYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHANISQ
NSISLPPFPGRECSIDQEVSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDSTTIP
FASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVNPPNRTFVKVYKSGSFGRS
LDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSV
WCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDDYATRQDSRNLSAGITSVGSLDF
Download sequence
Identical sequences A0A2H5N189 V4TNZ9
XP_006448968.1.91645 clementine0.9_001909m|PACid:19286084

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