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Domain assignment for clementine0.9_006057m|PACid:19275843 from Citrus clementina v165

Domain architecture


Domain assignment details

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Strong hits

Sequence:  clementine0.9_006057m|PACid:19275843
Domain Number 1 Region: 168-303,335-395
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, catalytic domain 6.28e-46
Family MurCDEF 0.00034
Further Details:      
 
Domain Number 2 Region: 418-564
Classification Level Classification E-value
Superfamily MurD-like peptide ligases, peptide-binding domain 8.93e-35
Family MurCDEF C-terminal domain 0.00053
Further Details:      
 
Domain Number 3 Region: 78-168
Classification Level Classification E-value
Superfamily MurCD N-terminal domain 1.22e-21
Family MurCD N-terminal domain 0.00022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) clementine0.9_006057m|PACid:19275843
Sequence length 575
Sequence
MGKLVASVSNSLHSPGSFLEKIETYFFGNIPLSFKSNRTAPSILLFMKKKNSVSVLTNCT
FKRNEECIVDFKNRKGWIHFVGIGGSGLSALAKLALKQGFEVSGSDLVWSSYMEGLLEAG
ANLHIGHSVSNIQGNDGSRFPNAVVASSAIPQDNVEILHAKSVGVPIYKRDYWLAKLTEK
YNLIAVSGSHGKSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADE
YDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQGARS
LLDQIKQDTGLKYSGGVVSNQSSDLWGQGHDYKIITYGFSSFNDWYAESVCPNVQGGSDY
ILCERGRPLAQISLQIPGVHNVLNSLAVIATVLTLIGDKRQSHESIACLKLPLSKFMGVS
RRFDLIGTIYGCHIYDDFAHHPTEVRAVLQAARQRFPNKALIVVFQPHTYSRLVVLKDDF
ANALSEADQVVVSAVYAARETNDWNFNGKDLAASIIGPPSEYIPCLGNVVDKLALQILRD
PHPEIVILTLGAGDVTTVGPKLLHELQTRSQDARH
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Identical sequences V4U7N1
XP_006422029.1.91645 clementine0.9_006057m|PACid:19275843

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