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Domain assignment for clementine0.9_000956m|PACid:19256146 from Citrus clementina v165

Domain architecture


Domain assignment details

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Strong hits

Sequence:  clementine0.9_000956m|PACid:19256146
Domain Number 1 Region: 268-659
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 6.02e-98
Family Regulator of chromosome condensation RCC1 0.00085
Further Details:      
 
Domain Number 2 Region: 21-129
Classification Level Classification E-value
Superfamily PH domain-like 2.08e-28
Family Pleckstrin-homology domain (PH domain) 0.0041
Further Details:      
 
Domain Number 3 Region: 658-731
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 2.45e-16
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0019
Further Details:      
 
Weak hits

Sequence:  clementine0.9_000956m|PACid:19256146
Domain Number - Region: 868-945
Classification Level Classification E-value
Superfamily Myosin rod fragments 0.0288
Family Myosin rod fragments 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) clementine0.9_000956m|PACid:19256146
Sequence length 1106
Sequence
MSRTDRMAADLSRTGGSIERDTEQAITALKKGACLLKYGRRGKPKFCPFRLSNDESVLIW
FSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEV
WFSGLKALISRSHHRKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSNDSLQKDGGDH
LRLHSPYDSPPKNGLDKTFSDVLLYSVPSKAFFPSDTASGSVHSLSSGGSDSVHGHMKAM
AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS
SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA
LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH
VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV
WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV
ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVA
VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV
SGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNC
FNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEG
RSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATS
PISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQVENLSRKAQLQE
VELERTTKQLKEAIAIAGEETAKCKAAKEVIKSLTAQLKDMAERLPVGTARNIKSPTFTS
FSSSPASIGVSNVSIDRLGGQTAAQEPDTDGSNNLLLANGSSTASNRSSKQGQLEAATRN
GSRTKEGESRNDNEWVEQDEPGVYITLTSLPGGLKDLKRVRFSRKRFSEKQAEQWWAENR
ARVYEQYNVRMIDKSSVGVGSEDFGH
Download sequence
Identical sequences V4U5Y7
clementine0.9_000956m|PACid:19256146 XP_006446270.1.91645

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