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Domain assignment for clementine0.9_004725m|PACid:19276701 from Citrus clementina v165

Domain architecture


Domain assignment details

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Strong hits

Sequence:  clementine0.9_004725m|PACid:19276701
Domain Number 1 Region: 70-205
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.84e-38
Family B3 DNA binding domain 0.0023
Further Details:      
 
Domain Number 2 Region: 526-607
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.0000000000000216
Family PB1 domain 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) clementine0.9_004725m|PACid:19276701
Sequence length 643
Sequence
MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT
PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ
QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV
GMRYKMRFEGEDSPDRRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE
IEPFVASATPNLVQPVLAKNKRPRLPMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAE
DKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWP
AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT
TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQG
VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEF
CNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAEK
Download sequence
Identical sequences V4TGR7
XP_006439307.1.91645 clementine0.9_004725m|PACid:19276701

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