SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGMOP00000018202 from Gadus morhua 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGMOP00000018202
Domain Number 1 Region: 626-1037
Classification Level Classification E-value
Superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions 1.49e-126
Family Lipovitellin-phosvitin complex; beta-sheet shell regions 0.00000897
Further Details:      
 
Domain Number 2 Region: 24-289
Classification Level Classification E-value
Superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions 3.26e-86
Family Lipovitellin-phosvitin complex; beta-sheet shell regions 0.00000132
Further Details:      
 
Domain Number 3 Region: 289-624
Classification Level Classification E-value
Superfamily Lipovitellin-phosvitin complex, superhelical domain 7.72e-85
Family Lipovitellin-phosvitin complex, superhelical domain 0.000000307
Further Details:      
 
Domain Number 4 Region: 1172-1342
Classification Level Classification E-value
Superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions 1.49e-59
Family Lipovitellin-phosvitin complex; beta-sheet shell regions 0.00011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGMOP00000018202   Gene: ENSGMOG00000016366   Transcript: ENSGMOT00000018649
Sequence length 1641
Comment pep:known genescaffold:gadMor1:GeneScaffold_1780:1291970:1300817:-1 gene:ENSGMOG00000016366 transcript:ENSGMOT00000018649 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LWCSLLTIYLYFAASIELKYAPEFAVGKTYTYKYEAVILGGLPEAGLARAGVKLSSKVII
NAEAPNTFLLKLVDPELYEYSGIWPTDPFVPATKLTSALAAQLLTPIKFQYANGVVGTIF
APAGVSTTVLNVFRGVLNLLQLNIKKTQNVYELQEAGTQGVCRTHYVIREDVKTERLHLT
KTKDLNHCQELIHKDIGLAYTEKCVQCQAQGMALKGAVAVNYILKPAATGALLLEATATE
LIQFSPFNILNGAAQMEAKQLLTYVGISKTPVLPIAAAYIPRGSLQYEFATELLQTPIQL
LRITNVEAQIVEVLIHLVTYNVAKVHEDAPLKFVELIQLLRVVSYERIDALWSQYKVKPA
YRHWFLNAVPAIGTHVSLKFIKEKFHLDDISVVEAAQALIGSIHMVTADLESIKLVEAMI
SHHKIQANAVLREVVMLGFGTMVNKYCVATPLCPVDLVKPIHDLLIQSVAKVDIDGAIIA
LKVLGNAGHPASLKPIMKLLPGFSTAAAALPLNLHIEAILALRNIAKKEPKLIQDLAVQV
FMDKALKAEIRMAAALVLFETRLPMGLVTAIADATLKESNLQVASFVYSYMKSMTKNTAP
DYASVAAACAVAMRMLSPKFDRLSLRFSRALYLDAYHNPMMVGAAASAFYINDAATVMPK
AVVAKARTYFAGAYADVLELGVRTEGIQEALLKLPQAPVDADRITKIKHFIRAISNWRAT
AVNQPLASVYVKFFGQEIGFASIDKAIIDQLIQVASGPSIATYGRKALEALLSGFSFHYA
KPMLVAEVRRIMPSNTGLPIELSFYTAAVAAATVEFATTVSPPLPLNFAAAQLLKSDIEI
RTAVTPSVSMHTYAVMGVNTALIQAAIMSIAKIHTIVPAKIEARIDVIKGNFKIQALPVQ
GLNKITAATVETFAIARNAEDLAAAKLTPMIPEIASKLASLTSSLGSGLSKSSEIIPVDL
PGNLIRKINLNAAFAKKMCGELKTFGIKVCAEIESRNAAAIKDCPLYAVVGKHALILEIS
PAAGPVIEKIEVEIQVGEKAVEKIIKVINRSQEEETVEERNVLLKLKKILVPGLRNATRS
SSSSSSSSSLKSSSSSSSSSRSSSSSSSSSSFIQRPRVEGKILFQQQSFEMKFSKTHIHQ
HSVSAARTSSRSSAASFEAIYNKAKYLANAINPTVTILVRAVRADHKAQGYQATAYWDKP
ASRVQLILANLVEENHWRICADAVLLSYEKIMAKVAWGIDCKEFETKINVETGLVGKSSA
MRLKFTWDKLPTSAKRYAKISRLSDYLGNAAQLAGLEMSKAKNSLKQLKLTLALTSDKTL
NVVLKTPKRTFYKLAVILPVYIPVGNTADELVAYQNSLSDKIIYVLTKANAAVCTIVNDK
VTTFNERIFKNQMPESCSQVLAQDCTEDLKFIVLLKKDLASNKKQINVNIADIEVDLIPL
NNNIIVKINGVILPTANLPYQHPTNKIQIKKLREGIALHAPSHGLQEVFLDANTLKVKVA
DWMKGQTCGLCGKADGEVREEYQTPNGRLASNSVSYAQSWVIPAESCRDLSKCYMKLESV
KLEKQMILHGEESKCFSVEPVLRCLSGCTPLKTIPVTVGFHCLPADSNMSSTHLNNIYEK
SEDLKENTEAHLACRCSAQCA
Download sequence
Identical sequences ENSGMOP00000018202

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]