SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for orange1.1g012439m|PACid:18128509 from Citrus sinensis v154

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  orange1.1g012439m|PACid:18128509
Domain Number 1 Region: 130-253
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.09e-41
Family B3 DNA binding domain 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) orange1.1g012439m|PACid:18128509
Sequence length 463
Sequence
MVGLIDLNKTKDDENPSSGSLASASGVSSELWHACAGPLISLPKRGSVVVYFPQGHLEHV
SDFSAAASAAYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDG
DEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAK
DLHGVEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQ
VKNGATFPSFCNQHSSTSSVTEVVDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHP
FAEGMRFKMRSETEDAAEQRCSGLIVGVSDMDPVRWPGSKWRCLLVRWDDVESNRHNRVS
PWEIEPSGSNILVTSGLRRTRIGLPLWRPEFPVPEGIGVTDFGESLRFQTVLQGQEISPK
SPYGRAPTNNEAHDIAALESLTVFRYQDLFIIGTCTRYRSAVS
Download sequence
Identical sequences A0A067F6V9
orange1.1g012439m|PACid:18128509

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]