SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|428216616|ref|YP_007101081.1| from Pseudanabaena sp. PCC 7367

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428216616|ref|YP_007101081.1|
Domain Number 1 Region: 29-147
Classification Level Classification E-value
Superfamily N-utilization substance G protein NusG, N-terminal domain 7.72e-31
Family N-utilization substance G protein NusG, N-terminal domain 0.00013
Further Details:      
 
Domain Number 2 Region: 143-212
Classification Level Classification E-value
Superfamily Translation proteins SH3-like domain 1.16e-16
Family N-utilization substance G protein NusG, C-terminal domain 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428216616|ref|YP_007101081.1|
Sequence length 213
Comment transcription antitermination protein nusG [Pseudanabaena sp. PCC 7367]
Sequence
MFAEEQDPDNLEAEIETEATAGQASGIKPRWYAVQVASGCEKKVKANLEQRLDTLEVQDL
IHQIEIPQTPTVKIRKDGSRQSAQEKVFPGYVLIKMNMDDHAWQVVKNTPHVINFVGTEQ
KRPYGRGRGHVTPRPLSRSEAERIFRIAVEQETIVKIDMAAGDKIKVLSGPFKDFEGEVV
EVTPERSKLKALLSIFGRDTPVELEFNQVEKQN
Download sequence
Identical sequences K9SEN5
WP_015163627.1.5078 gi|428216616|ref|YP_007101081.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]