SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|428216820|ref|YP_007101285.1| from Pseudanabaena sp. PCC 7367

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428216820|ref|YP_007101285.1|
Domain Number 1 Region: 168-412
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.33e-71
Family Extended AAA-ATPase domain 0.0000000288
Further Details:      
 
Domain Number 2 Region: 422-621
Classification Level Classification E-value
Superfamily FtsH protease domain-like 1.1e-70
Family FtsH protease domain-like 0.00000219
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428216820|ref|YP_007101285.1|
Sequence length 628
Comment membrane protease FtsH catalytic subunit [Pseudanabaena sp. PCC 7367]
Sequence
MKTSWKTILLWAVPIAVIGFFVWQSFFSQPVQSMSINAANTRLSYSRFLEYLDEDMVRRV
DIYDGGRTAVVAAIDPQLQNREQRARVDLPMYAPELMSKLKDSGVDLAVYPPRNNGAIWG
FLSNLIFPIALIGGLFFLFRRSSQMGGPGQAMDFGKSKARFSMDASTGIKFDDVAGIEEA
KEELQEIVGFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSVSGSE
FVEMFVGVGASRVRDLFKKAKESAPCIIFVDEIDAVGRQRGAGIGGGNDEREQTLNQILT
EMDGFEGNTGIIVIAATNRPDVLDAALLRPGRFDRQVTVDAPDMKGRLQILHVHARGKKI
AEDVSLDSIARRTPGFTGADLSNLLNEAAILTARRRKDAITLLEIDDAVDRVIAGLEGKP
LVDSKYKRIIAYHEVGHAIVGSLIKEHDPVQKVTLIPRGQAAGLTWFAPSEEQMLISRAQ
ILARITGALGGRAAEEAVFGHGEVTTGAGNDLQQVTGMARQMVTRFGMSDVIGPLSLEGQ
SSQVFLGRDLMSRSEFSEDISSRVDNQVRDIVNSCYNKALQIMNDNREAIDRVVDILVEK
ESIDGEEFRQILAEYTVVPEKETATPVL
Download sequence
Identical sequences K9SE26
WP_015163831.1.5078 gi|428216820|ref|YP_007101285.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]